Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00331 ATGGCAATGCAGTGGGTTTACATTTCAATAGCCACTTTGTTGGCATGCTACatttttctaaacaaatttGTAAGGAATTTTAATGGATGGTACTATCATCTAAAACTAAGAAACAAAGAGTACCCTTTGCCTCCTGGTGATATGGGATGGCCTCTTATTGGCAATCTATTAGCATTCATCAAAGATTTCTCATCTGGCCAACCTGATTTATTCATTACCAACCTTATTCACAAatatggAAGAAACGGTATCTACAAAACTCACTTGTTTGGAAACCCTAGTATAATTATTTGTGAGCCTGAGATGTGTAGACGAGTGCTCTTAGACGATGTGAACTTTAAGCTTGGTTATCCAAAATCGATCAAAGAGTTGGCAAAATGTAGACCCATGATTGATGTTTCTAATTCAGAACATAGACATTTTCGACGCTTAATTACCGCTCCTATTGTTGGTCACAAGGCATTAGAAGTGTACCTAGAACGTCTTGAGGACATTGTGATAAATTCTTTAGAGGAATTGTCTAGCATGAAACACCCTATTGAGCTCTTGAAAGAGATGAAGAAGGTTTCCTTTAAATCTATTGTCCATGTTTTCATGGGCTCCTCTAATGAGAACATTATTAAACACATTGGAAGTTCATTTACCGATATATATAATGGCATGTTCTCTATCCCTCTCAATGCACCTGGTTTTACTTTCCACAAAGCACTCAAGTCACGCAAGAAGATAGCCAAAATAGTTCAACCTATTGTGAATGAAAGGAGATTGATGATTAAAAATGGAGAACATGTAGGAGAAAAAAAAGATCTTATGGATATTCTCTTAGAAATCAAAGATGAGAATGGTAGAAAATTGGAGGATGAAGATATTAGCGACTTATTAATTGGACTTTTATTTGCTGGACATGAAAGTACAGCAACTGGACTAATGTGGTCAATTATATATCTTACACAACATCCACATATTATGAAAAAAGCAAAGGCAGAGCAAGAAGAAATCTTGAGGAAAAGACCGGCCTCCCAGAAACGTTTGAGTCTTAATGAAGTCAAACAAATGGTTTATCTTTCTCATGTAATCAATGAAGTGCTACGATGTGCCAACATTGCATTTTCAACTTTTCGAGAGGCAACATCTGATATCAACATTAATgGTTATCTCATACCAAAAGGATGGAGAGTGTTGATATGGGCAAGAGCAATTCATATGGATTCACTATATTATCCAAATGCGGAAGAATTCAATCCATCAAGATGGGATGATTTCAGTGCCAAGGCAGGAACCTTTCTTCCTTTTGGAGGAGGAAGTAGGCTTTGTCCTGGAGGAGACTTAGCCAAACTTGAAACATCTGTATTTCTTCATTATTTCCTCCTTAATTACAGGTTGGAACGAATAAATCCAGAATGCCATGTCACAAGCTTGCCAGTATCTAAACCCATTGACAATTGTCTCGCTAAAGTCATAAAGGAATCATGTGCTTAG 1479 0.3644 MAMQWVYISIATLLACYIFLNKFVRNFNGWYYHLKLRNKEYPLPPGDMGWPLIGNLLAFIKDFSSGQPDLFITNLIHKYGRNGIYKTHLFGNPSIIICEPEMCRRVLLDDVNFKLGYPKSIKELAKCRPMIDVSNSEHRHFRRLITAPIVGHKALEVYLERLEDIVINSLEELSSMKHPIELLKEMKKVSFKSIVHVFMGSSNENIIKHIGSSFTDIYNGMFSIPLNAPGFTFHKALKSRKKIAKIVQPIVNERRLMIKNGEHVGEKKDLMDILLEIKDENGRKLEDEDISDLLIGLLFAGHESTATGLMWSIIYLTQHPHIMKKAKAEQEEILRKRPASQKRLSLNEVKQMVYLSHVINEVLRCANIAFSTFREATSDININGYLIPKGWRVLIWARAIHMDSLYYPNAEEFNPSRWDDFSAKAGTFLPFGGGSRLCPGGDLAKLETSVFLHYFLLNYRLERINPECHVTSLPVSKPIDNCLAKVIKESCA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00331 492 Gene3D Cytochrome P450 34 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 PANTHER CYTOCHROME P450 88D6 22 467 - -
Tsu08g00331 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Tsu08g00331 492 PANTHER CYTOCHROME P450 26 22 467 - -
Tsu08g00331 492 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 Pfam Cytochrome P450 44 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00331 492 SUPERFAMILY Cytochrome P450 38 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00331 Tsu-Chr8 3213732 3216968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00331 13 486 Cytochrome P450 AT1G05160 46.737 9.39e-167 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00331 K04123 K17875 ag:BAG68929 853.203