Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00327 ATGACTTCCTCTGCTACTAAATTCTACACCATCTTCATGTTCATTTGTCTTGCACTTCTCCTTATTAGCACATTGGaGGTGGAAGCAAAAGTTTGTCAAAAGAGAAGCCAAACATGGACAGGTCCTTGTGTTGTAACGGCAAACTGTAAAAAACAGTGCATCAACGTGGAACAAGCAACTTTTGGTGCTTGTCACCATCAAGGCTTTGGTTTTGCTTGCTTCTGCTACTTCAAATGCTGA 240 0.4125 MTSSATKFYTIFMFICLALLLISTLEVEAKVCQKRSQTWTGPCVVTANCKKQCINVEQATFGACHHQGFGFACFCYFKC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00327 79 PANTHER DEFENSIN-LIKE PROTEIN 1 1 79 - -
Tsu08g00327 79 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 1 79 - -
Tsu08g00327 79 Pfam Gamma-thionin family 30 79 - -
Tsu08g00327 79 ProSitePatterns Gamma-thionins family signature. 30 53 IPR008176 GO:0006952
Tsu08g00327 79 Gene3D - 31 79 IPR036574 -
Tsu08g00327 79 SUPERFAMILY Scorpion toxin-like 29 79 IPR036574 -
Tsu08g00327 79 SMART gth_4 31 79 IPR003614 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00327 9 79 Plant Defensins Gene Families AT1G19610 51.351 3.05e-23 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00327 - - mtr:MTR_8g012775 144.436