Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00321 ATGACCTACAAATCATTAGAAGAAGCAAAAAGTTGCACCCAAACTCATCAATTAGAAGAAGCAAGTTGCACCGAAACTCAACAATCCTCTAAAAATACAGAAGATGCAATTCTCATTCTTCTTGCCATTGCCGTATTTATTGGCATACCTTTCGTCGTCCTAATTAACAGTGGGCCTTCTCGAACCATGTTCGGCGTAGCTGAAGCCTCAATAGCGCGTTTTAACCTCACAAGCAACAACAccttatattataattttaaggtCACCATTATAGCAAAAAACTTGGGCAGCAACATAAAATCTTATGATGAGGTTACTGTAATTGCTTCATATAAAAGTAATCAATTAGCTTCGGTGAAAATGGCACCCTTTAAGTTAAGTGGTAAGAATATTGTTATGCTTGAGCCCATAGTGTTTGAAGGGAATAATGTGATGATATTCAAGTCTCAACAACTTGCTAAGTATAATAAGGAGACACAATTAGAGATTTACAACTTAGATTTGGACTTAGATTTGAACTACTTTAGTACTCATATTCATTGTCCAGATTTGAGAGTTCCTTTAATTTCCAATGGTAAAGTAGCATCTACTTTCAATGTAACCACTTGCTCGTACAAGGATTGA 624 0.351 MTYKSLEEAKSCTQTHQLEEASCTETQQSSKNTEDAILILLAIAVFIGIPFVVLINSGPSRTMFGVAEASIARFNLTSNNTLYYNFKVTIIAKNLGSNIKSYDEVTVIASYKSNQLASVKMAPFKLSGKNIVMLEPIVFEGNNVMIFKSQQLAKYNKETQLEIYNLDLDLDLNYFSTHIHCPDLRVPLISNGKVASTFNVTTCSYKD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00321 207 PANTHER OS05G0367900 PROTEIN 43 204 IPR044839 GO:0098542
Tsu08g00321 207 PANTHER HARPIN-INDUCED 1 43 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00321 Tsu-Chr8 3051619 3052242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00321 64 180 SNARE and Associated Proteins AT1G32270 28.814 1.34e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00321 - - lja:Lj4g3v0630970.1 118.242