Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00316 ATGAAATTTCAATGGTTTTGGATATCTGCTGCCACTTTGTTAGCATGCTACATATTTGTTAACAAAGTTTTGAGGAATTTGAATGATTGGTATTATGATCTTAAATTAAGAAAGAGACCAAATCCACTACCTCCTGGTGACATGGGATGGCCTTTAATTGGAAACCTTTGGCCTTTCTTCAAATGTTTCTCATCTGGTAACCGTGAGACATTCGTCAACAACATTACACATTTGTATGGAAGTCCAAGCATTATTGTCACTGCACATGATATTTGCAAGAAAGTCCTAAATGATGAGGTGACCTTTAAGCTTGGTTATCCAAAAGCCGTCACTGTACTAGCATCAAATAGGGTACTAAGTAGTGAACACGGACGCCTTAAGCGACTAGTCACGGCTCCTATTGCTGGTCACAATGTATCAACAATGTACCTAGAACGTATCGAAGATATTGTGATCAACAAGCTAGAAGAACTATCTAGCATGAAACACCCTATCGAGTTCCTTGATGAGATGACAAAAGTTTCCTTTCAATTCGTCATTCAAATTTTCTTGGGCTCTTGTGATCAAGGTACCGTGAATAAAATTGGAGATTTATTTCATGTTATGAGTAGTGCCTTGTTCTCTTTGATGCCCATAAATGTACCTGGTTTTCTTTTCAACAAAGCACTTAAGGCGCGGAAGAAGTTCGCAAAAATAGTTCAATCTATTATCGATGAAAGGAGAATGACAGCAAAAAATGGACAAATTGGGGAAAAGAATGATTTATTAAACATTCTTTTGGAAATTAAGGATGAAGAAGGTGAAAAATTGGAGGATAAGGACATTATTGACTTGCTGATATCGCTTCTATTTGGTGGTCACGATTCAACTGCAGCTGGTATGATGTGGACAATTATGCATCTTACTCAACATCCACATTGTATGAAGAAAGCCAAGGAAGAGCAAGAAGAAATCATGAAAGCAAGACCACCCTCGCAAAAACGACTAAGTATtgaggaaattaaaaaaatggtttatcTTTCTCAGGTTTTTGATGAAACATTACGCCATACCTCTATCTTTTCACTTTTTCGAGAGGCAACAACTGATGTGAACATCAATGGTTATTTCATTCCAAAGGGATGGAAAGTGTTAGTTTGGCTAAGCGCTATGCATATGGCTCCTGATCATTACTCAAATCCAGAAGAATATAATCCATCTAGATGGGATGATTATAATCCTGCAACGGGAACCTTTCTTCCTTTCGGAATAGGTCGGCGGCTTTGTCCAGGAAGAGACTTGGCCAGATATGAAATGACCATATTTTTACATTAtttcatccttaattataaGTTGGAGCGGATAAATCCAGAATGTCCATTAACTACTTTGCCATATTCTATGCCAATAGACCATTGCCTCGCTAGGGTCATAAAGTTGTCTGATTCCTAA 1431 0.3704 MKFQWFWISAATLLACYIFVNKVLRNLNDWYYDLKLRKRPNPLPPGDMGWPLIGNLWPFFKCFSSGNRETFVNNITHLYGSPSIIVTAHDICKKVLNDEVTFKLGYPKAVTVLASNRVLSSEHGRLKRLVTAPIAGHNVSTMYLERIEDIVINKLEELSSMKHPIEFLDEMTKVSFQFVIQIFLGSCDQGTVNKIGDLFHVMSSALFSLMPINVPGFLFNKALKARKKFAKIVQSIIDERRMTAKNGQIGEKNDLLNILLEIKDEEGEKLEDKDIIDLLISLLFGGHDSTAAGMMWTIMHLTQHPHCMKKAKEEQEEIMKARPPSQKRLSIEEIKKMVYLSQVFDETLRHTSIFSLFREATTDVNINGYFIPKGWKVLVWLSAMHMAPDHYSNPEEYNPSRWDDYNPATGTFLPFGIGRRLCPGRDLARYEMTIFLHYFILNYKLERINPECPLTTLPYSMPIDHCLARVIKLSDS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00316 476 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Tsu08g00316 476 Pfam Cytochrome P450 77 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PANTHER CYTOCHROME P450 88D6 22 451 - -
Tsu08g00316 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Tsu08g00316 476 Gene3D Cytochrome P450 35 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00316 476 PANTHER CYTOCHROME P450 26 22 451 - -
Tsu08g00316 476 SUPERFAMILY Cytochrome P450 36 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00316 Tsu-Chr8 3024895 3027932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00316 13 472 Cytochrome P450 AT2G32440 42.469 8.63e-140 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00316 K04123 K17875 ag:BAG68929 576.63