Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00314 ATGGAATTTCAATGGTTTTGGATGTGCACTGCTACTTTGTTGGCttgctacatttttttttacaaaattatgagGAATTTAAATGATTTGTATTATGATCTTAAATTGGGAAAGAAACAATATGATCAACTACCACCTGGTGACATGGGTTGGCCCTTAATTGGAAACCAATTGCCTTTCTACAAATATTTCTCATCTGGTCAAGGGGATACATTCATCAACAACATTGTTCTCAAATATGGACAAACTGGTATCTACAAGGCACACTTATACGGAAGTCCGCGCATCATTGTCATTGATCCTACGTTGGTAAAGAAAGTGATGAACGATGATGTGAACTTTAAGGCAAGTTATCCAAAAGGAACCAATGTCCTAGGAAGGAGTAGATACCTAAATAGAGACCATAAACGTTTTAAAAGACTAGTAACATCTCCCAGTGTTGGCCAAAATACACTAGTAATGTACTTGGAACGTATTGAGGATATTGTGATCGATAAGCTAGAAGAATTGTCCACCATTAAACACCATGTGGAGTTACTTAAAGAGATGAAGAAGGTTTCCTTTAAAGTCATTTTTCACATTTACCTCTACTCTTGTGATCAAAATATCGTCAACAAATTtggagatttatttaatattatgtCTGCTACCATGTTCTATTTGATGCCCATAGATGCACCTGGTTTTGCTTTCAGAAAAGCTCTCAAGGCACGTAAGAAGATGATCAAAATAGTTCAATCCATTATTGATGAAAGGAAAGCGATGATAGAAGAAAATGGGCAAGTTAAGGAAAAGAAAGATCTCTTGGATATATTTTTGGGAATGACTGATGAGATGGGTGAAAAATTGGATGATGAGGATATGATTGACTTACTTATAACACTTCTACTTGCTGGTCACGAAACTTCAGCACTTGCTATGGTTTGGTCAGCTACATTTCTTACACAACATCCACTTTGTTTGAAGAAAGCCAAGaTGCCTTGGATAAGAGCTGTTCATATGAATCCTCAGTATCACTCAAATCCAGAAGAATTTAATCCCGCAAGATGGAATGATTTTAATTCCACAACAGGGACCTTTATTCCCTTTGGAGTAGGTCGACGGCTCTCTCTAGGACGTGACCTAGCTAAATTTGAACTGACCATATTTCTACACTATTTTCTCCTTAATTacaagTTGGAGCTAAAAAATCCAGAATGTCCTGTAACTCATTTTCCAGCTCTTAAGCAATTAGACAACTGTCTTGGCAAGATCATAAAGCACTCCTCTAGTGATTGA 1278 0.3568 MEFQWFWMCTATLLACYIFFYKIMRNLNDLYYDLKLGKKQYDQLPPGDMGWPLIGNQLPFYKYFSSGQGDTFINNIVLKYGQTGIYKAHLYGSPRIIVIDPTLVKKVMNDDVNFKASYPKGTNVLGRSRYLNRDHKRFKRLVTSPSVGQNTLVMYLERIEDIVIDKLEELSTIKHHVELLKEMKKVSFKVIFHIYLYSCDQNIVNKFGDLFNIMSATMFYLMPIDAPGFAFRKALKARKKMIKIVQSIIDERKAMIEENGQVKEKKDLLDIFLGMTDEMGEKLDDEDMIDLLITLLLAGHETSALAMVWSATFLTQHPLCLKKAKMPWIRAVHMNPQYHSNPEEFNPARWNDFNSTTGTFIPFGVGRRLSLGRDLAKFELTIFLHYFLLNYKLELKNPECPVTHFPALKQLDNCLGKIIKHSSSD 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00314 425 SUPERFAMILY Cytochrome P450 43 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00314 425 Gene3D Cytochrome P450 36 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00314 425 PANTHER CYTOCHROME P450 88D6 22 325 - -
Tsu08g00314 425 PANTHER CYTOCHROME P450 88D6 329 399 - -
Tsu08g00314 425 Pfam Cytochrome P450 327 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00314 425 Pfam Cytochrome P450 45 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00314 425 PANTHER CYTOCHROME P450 26 329 399 - -
Tsu08g00314 425 PANTHER CYTOCHROME P450 26 22 325 - -
Tsu08g00314 425 Gene3D Cytochrome P450 327 416 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00314 Tsu-Chr8 3013278 3020749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00314 23 420 Cytochrome P450 AT2G32440 31.557 6.80e-80 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00314 K04123 - mtr:MTR_4g029690 404.831