Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00313 atggCCAAGGATAGTGTTGTTTTATTACTCGTTGTGTTTTTAGTTTTGGCATCAAACATTTCTTTGGTGTGTGATGCCTCCGAAAGTGGTAATGAAAGCAGTAAACTTTACATTGTATACATGGGCTCACTTCCTAAAGAAGAATCATATTCCCCAACCTCTCACCATATTAGCTTGTTGCAACAAGTTATCGATGATGATAATGACATACAAAATTGCTTAGTTCGAAGTTACAAGAAGAGTTTCAATGGTTTTGCCGCTATACTCAATGATCAACAAAGGGAAAAACTTGCTGGCATGACTGGTGTGGTCTCAGTGTTTCTAAGCCAAGAGTACCACCTTACAACCACGAGGTCGTGGGACTTCATTGGTTTACCCCAATCTATCAAACGAGACCAAACTGTTGAAAGTGATTTGGTGATCGGAGTCATAGATACTGGAATTTGGCCAGAAACTGAAAGTTTCAATGATAAAGGTCTTGGTCCTATTCCAAGAAAATGGAACGGAGTTTGTGCAGGTGGGCGTAACTTCAGTTGCAACAAGAAGATAATCGGAGCACGATTCTATGCTCGTGGAGATGATAGTGCAAGAGATATTACTGGTCATGGAACTCACACATCATCAATAGCAGGTGGAAGAGAGGTGAAAGGTGTAAGTTTTGATGGTCTTGCAAAAGGCACTGCAAGAGGTGGAGTTCCATTTTCAAGGATTGCTGCATACAAAATTTGTAATTTGCATGATGTTTTAACATGCACTAGTGATTCTATGTTAGCTGCATTTGATGATGCCATTGCTGATGGAGTAGACGTCATCAGTATCTCTATGGGTTTATTACCACCCAAAGTAGGTTTATTACCAAACAATGAATTTGTGAATGATGCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAGGGAATACTCACAACGCAAGCTGCAGGAAACAATGGTCCTGAACCAAGTAGTACTAGAAGTGTCGCACCTTGGTTATTTAGTGTTGCTGCAACGACCATCGATCGTCAATTCACTACTAAGCTCATTCTTGGAAATGGAAAGACTTTTATCGGTAAGTCAATCTATACCGGCCCTTCAAATGGAACCAGATTTCCAATAGCTGTGCGTAATAGTAAAGGTAATTGCCCCAATGGAGGAAATATAGGTCGTGAAATCTGCGATTGTTTTGACAAAAGAATAGTGAAGGGTAAGCTTGTTTTGTGTGGATTTGGTATAATATATACTCCTAATACAGGTATAATTGGTACAATACGAAATGTTACACATTCTGAATTTGAACTTTCTGATGTAGTTTTAAAGCCTTCACTTAACTTGGAAACAAAGGACTTTGTTCAAGTTAAATCTTACACAAATTCCACTAAATACCCTGTAGCTGAAATTTTAAAGAGTGAGATGTTCCATGACACCAATTCTCCAAAAGTTATCTATTTCTCTTCTCGTGGCCCAAATCATTTGATTCCAGAAATTATGAAACCAGATATAAGTGCTCCAGGAGTGAATATCTTGGCTGCATATTCACCTTTAGGGTTACCCTCAATAGATTTTGATGACAAGAGAAAGTTCAAATACAACCTATTATCCGGAACCTCTATGGCATGTCCTCACATTGCTGCAGTTGTTGCATATGTGAGATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACTGCAAAACCAGTGCTGGGTACTTATGATGATTTGGCAGGTGAATTTGCTTATGGTTCTGGGAATATCAATCCACAACAAGCCATTCACCCAGGACTTGTTTATGACATCACTAAGGAAGATTACGTGCAAATGCTTTGTAATTATGGTTATGATGcagaaaaaattaaacaaattagtGGAGATAATTCTAGTTGTCATGGAGCGCCTCAAAGATCCTTATTGAAAGATATAAACTATCCTGCAATGGTGATTCCCGTTGTGTCTGATAATAAGCATTTCGAAGCCAAGATTCATAGAATAGTCACAAACGTTGGTTTTCCAAACTCAACCTACAAGGCTACTCTCAtccatcaaaatccaaaaatcaAGATAGAAGTTCAACCAAAACTTCTCACATTCAGATCATTACATGAGAAACAATCATTTGTTGTCACTATTATTGGGAGAGAAATATTAAATCAAACTGTGTTTTCCTCATCACTCATTTGGTCCGATGGCACCCACAAAGTCAAAAGTCCCATTATTGTGCAAATACTACCTCAATAG 2247 0.3796 MAKDSVVLLLVVFLVLASNISLVCDASESGNESSKLYIVYMGSLPKEESYSPTSHHISLLQQVIDDDNDIQNCLVRSYKKSFNGFAAILNDQQREKLAGMTGVVSVFLSQEYHLTTTRSWDFIGLPQSIKRDQTVESDLVIGVIDTGIWPETESFNDKGLGPIPRKWNGVCAGGRNFSCNKKIIGARFYARGDDSARDITGHGTHTSSIAGGREVKGVSFDGLAKGTARGGVPFSRIAAYKICNLHDVLTCTSDSMLAAFDDAIADGVDVISISMGLLPPKVGLLPNNEFVNDAIAIGSFHAMEKGILTTQAAGNNGPEPSSTRSVAPWLFSVAATTIDRQFTTKLILGNGKTFIGKSIYTGPSNGTRFPIAVRNSKGNCPNGGNIGREICDCFDKRIVKGKLVLCGFGIIYTPNTGIIGTIRNVTHSEFELSDVVLKPSLNLETKDFVQVKSYTNSTKYPVAEILKSEMFHDTNSPKVIYFSSRGPNHLIPEIMKPDISAPGVNILAAYSPLGLPSIDFDDKRKFKYNLLSGTSMACPHIAAVVAYVRSFHPDWSPAAIKSAIMTTAKPVLGTYDDLAGEFAYGSGNINPQQAIHPGLVYDITKEDYVQMLCNYGYDAEKIKQISGDNSSCHGAPQRSLLKDINYPAMVIPVVSDNKHFEAKIHRIVTNVGFPNSTYKATLIHQNPKIKIEVQPKLLTFRSLHEKQSFVVTIIGREILNQTVFSSSLIWSDGTHKVKSPIIVQILPQ 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00313 748 CDD PA_subtilisin_like 346 465 - -
Tsu08g00313 748 SUPERFAMILY Subtilisin-like 114 599 IPR036852 GO:0004252|GO:0006508
Tsu08g00313 748 Pfam Subtilase family 137 586 IPR000209 GO:0006508|GO:0008236
Tsu08g00313 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Tsu08g00313 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Tsu08g00313 748 Gene3D - 339 472 - -
Tsu08g00313 748 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 36 745 - -
Tsu08g00313 748 Gene3D Peptidase S8/S53 domain 138 608 IPR036852 GO:0004252|GO:0006508
Tsu08g00313 748 Pfam Fibronectin type-III domain 643 743 IPR041469 -
Tsu08g00313 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 745 IPR045051 -
Tsu08g00313 748 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Tsu08g00313 748 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Tsu08g00313 748 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Tsu08g00313 748 Gene3D - 612 746 - -
Tsu08g00313 748 ProSiteProfiles Serine proteases, subtilase domain profile. 119 595 - -
Tsu08g00313 748 Pfam Peptidase inhibitor I9 37 114 IPR010259 -
Tsu08g00313 748 CDD Peptidases_S8_3 112 568 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00313 Tsu-Chr8 3001977 3004547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00313 1 746 Subtilisin-like Serine Gene Family AT5G59100 48.485 0.0 687