Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00304 ATGGATAAAGAGGAATCCCCACAAATTCCCAGAAGAACGACAAGGTCTTTAGCTTCAACATCCACTTCAAATATTAAACCTGCATCAAAAGAAAACAACAGCCTTGAATCCCTAACAATTAATGACCTTTTGGTTGGAGGAGACCCTATTAGCCTAGATGATATAATTTCCAGTTTTCCTGGTAGAAGTAGTCAGATTCATGAGATTGTGCGTCTTTTAGGACCTTTGAATTCGCCAATACTTCCTATGTTTGTGTATGGAGGTGCTTCTACTGGAAAAACCAGTATCATTCTTCAATTATTCAAACATCTCCAAAGGCCTCTTGTTTATTCTAGTTGTAGGACGTGTTATAACCAACGTATCTTATTCGAGTCTGTTCTAAATCAGTTACTTCTCCATAGAAAAAATGCTGCCAATTGTTATACAAATGCGAAGCGTTGTGAAAGACCATCCGATTTTATCAATTTTCTTCGCGAAGCATTGACCAGTGTTATAGATAATCTGAAGGTGAAATCAGAAAAATCGATCTCAGAAAAGAATATGCATGGGGGAATGGGAAATATGATCTACTTGGTATTTGACAATTTTCATCTTGTTCGAGATTGGGACAAAAGCTCGACAATACTACCCTTACTGTTTAATCTCTATGATATGCTAAAGATGCCTGAGGTTGGTCTGATTTTCATCAGCAGTACTTCACCAGATACCTTTTACTCTACTAACATGGGTTATGTGGAGCCTATCCCCATCTACTTTCCGGATTACACAGAAAGCGATATGCGTAAAATCTTATTGAGAAACCAAGCAAACCAGAAGTTGTATTCCTCATTTCTCGATGTAGCTTTGAGACCTTTCTGCAGAATTACTAGGCAAGTTGGTGAGTTGTCTTCTGCATTAAAGCcattatttgaaaaatattgcgAACCTTTAAGTGATAAGGGAAAGGGAGTTGTTCCTAATGAAGACATGAAGAGGAGGCTATTCAATCACATCAAGCCTCATATTGCTTCCTCTCTGAATGATGTATTTAAGGTTTCATCTCCTCCTTCAAGTGAAACTGAGAGTGGTAAAGAGACAAAGCTTAAGGGGAATCTGAAGAGATCGGAGAGATCTGAGGAAATCGGTGATCTTGATTTTCATATGTCGACCAGTGCAAAGTATCTTCTTATTTCAGCATTTCTTGCCTCCAGAAACCCTGCTACTCTTGATGCTTCACTTTTTGATTCCAAGGGTGGTTCTGATAATCGAAAGCGTAAGAGGAAGGCCTCTGAGAAAGCACTTGAAAAGAAGGAAATGTTAGAAGAGGAACTACTGATGAAAGGACCTGGAACTTTCCCATTGGAGAGATTGATAGCCATCTTTCAGTGTATTGTTTCTGTTGGAGAAGACCCAtctgatgaagaagaacaaAACAATGAAGAACTAGGAGCTCAATGTGGCAGCGGTTCATTGATGTCTGATGTTCTTTTGCAGCTATCCACTCTCTGCAatgctaattttattttcaaaggaAAGAGTTGTCCAATTGAAGGCTCAACTCGGTATCGATCAACTATATCTGAAGACCTGGCTTTAAAGGTTGCAAGGAGCCTAAAGTTCCCATTGTCAAAGTATCTGTACAGAACTGGAATGCTAAGCATGCTTGGAATCAAAGCCAAAGGTGGAATGGATAATTATGTTATCACCATTGCAGTTCATTGTATGGATGGAATGTTTATTATCTAG 1725 0.3786 MDKEESPQIPRRTTRSLASTSTSNIKPASKENNSLESLTINDLLVGGDPISLDDIISSFPGRSSQIHEIVRLLGPLNSPILPMFVYGGASTGKTSIILQLFKHLQRPLVYSSCRTCYNQRILFESVLNQLLLHRKNAANCYTNAKRCERPSDFINFLREALTSVIDNLKVKSEKSISEKNMHGGMGNMIYLVFDNFHLVRDWDKSSTILPLLFNLYDMLKMPEVGLIFISSTSPDTFYSTNMGYVEPIPIYFPDYTESDMRKILLRNQANQKLYSSFLDVALRPFCRITRQVGELSSALKPLFEKYCEPLSDKGKGVVPNEDMKRRLFNHIKPHIASSLNDVFKVSSPPSSETESGKETKLKGNLKRSERSEEIGDLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKASEKALEKKEMLEEELLMKGPGTFPLERLIAIFQCIVSVGEDPSDEEEQNNEELGAQCGSGSLMSDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISEDLALKVARSLKFPLSKYLYRTGMLSMLGIKAKGGMDNYVITIAVHCMDGMFII 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00304 574 MobiDBLite consensus disorder prediction 1 30 - -
Tsu08g00304 574 MobiDBLite consensus disorder prediction 410 426 - -
Tsu08g00304 574 MobiDBLite consensus disorder prediction 11 30 - -
Tsu08g00304 574 MobiDBLite consensus disorder prediction 404 426 - -
Tsu08g00304 574 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 51 541 IPR020796 GO:0000808|GO:0005634|GO:0006260
Tsu08g00304 574 Coils Coil 416 436 - -
Tsu08g00304 574 Gene3D - 59 240 IPR027417 -
Tsu08g00304 574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 325 IPR027417 -
Tsu08g00304 574 MobiDBLite consensus disorder prediction 342 368 - -
Tsu08g00304 574 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 250 539 IPR020796 GO:0000808|GO:0005634|GO:0006260
Tsu08g00304 574 Pfam AAA ATPase domain 59 215 IPR041664 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00304 3 541 Core DNA Replication Machinery Family AT4G29910 60.000 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00304 K02607 - gmx:100782175 819.305