Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00301 ATGgatcttccttcttctttttttcaatttattgcATCCATCTTAGCCTTATTGATTGTACAATTTGTCTCTAGATCTATTAGATCTCCTAATAGacctaaaaaatttacattattCAACATCAAACATAACAAAGTACCCGAACCATATTATGCTTTACCTTTCATAGGCCACCTTCATCTTCTAAGCACTAAAGAACCATATTTTAGGACATTTTCAACCATGGCTGAAAAATATGGTTCAATCTTTTCCCTTAGGCTTGGTTGTCACAATACCCTAGTGGTGAATAATAGAGAAATTGCCAAAGAATGTCTCACAAAAAATGACCAAGTTTTTGCCTCAAGGCCTAACGTAGCCGCAGGTAGATACTTAGGATACAATAATGCCATTTTAGCTCTTGCACCTTATGGTGATTATTGGAGAAATATGAGAAAAATTTCCACTATTGAGCTTTTATCAAGTCATAGACTTGAAAAGCTAAAGCATGTTAGGGACTTAGAGATATATTCTCTACTAAAAAATTTGTACACATTTGTTAAAAATTCAAATGGTGCAATTGAAGTACCTATTAGCAAATTTTTAGATCATATGACATTTAATATAATTGTAAGAATGATAGCTGGGAAAAGATTTGGAGGTGAAACAATAAATCAAGAAGATAGTGAGGCATGGAgattaagaaatgcaattaaAGATACAACATATCTAAGTGGTGTTTTTGTGGTTGCTGATGCTATTCCTTTTCTTAGTTGGTTTGATTTTCAAGGCCATATTGGTTTCATGAAGAGAACTTTTAAGGAAATGGATTTTATTCTTGATAAGTGGATGCATGAACATTTTAGAAAGAGAGATGAGGGACAAAATGGTAAATGTGAAGATGATTTCATGGATGTATTGATATCAATGTTTGAAGAGCATGATGAAATTTGTGGCCACAAACGAGAGGTAGTTATCAAAGCAACATCCATGATACTTATCCTTACAGCCTCAGGAAGCACAGCAATAACACTAGCATGGGCTCTCTCCCTTCTCATAAACCATCCAAAGGTCTTAAAACAAGCCCAACAAGAATTGGACAACAACATAGGAAAACACAAATGGGTCCAAGAATCTGACATCAAACACCTAAAATATCTTCAATCAATTATCAAAGAGACACTTAGGTTATACCCACCAGCACCCTTAACTGGAATAAGAGAAGCCACTGATGATTGCCACGTGGCAGGCTACCATATCCCTAAAGGTACACGTATGCTTATTAACTTATGGGAATTGCAAAGAGACCCACAAATATGGTCAAACCCTAATGAATTTCAACCTGAAAGATTTCACAACACTTTTGATCATGATTTTCAAAATCAAGATTTTGGGTATGTACCATTTAGCTATGGAAGAAGGTCATGTGCTGGTGCAACATTTGGGTTGCAAGTGTTGCATTTGACTTTAGCTAGGTTAATTCAAGGGTTTGATATATACACAAAAGAAGGTGGTGTTGTTGATATGATTGAAGGAGTGGGATTGGCTTTGCCTAAGGAAAATCCACTTGAGGTTATGTTACAACCACGTCTTCCATTGGATCTTTATgaaaatctttga 1596 0.3402 MDLPSSFFQFIASILALLIVQFVSRSIRSPNRPKKFTLFNIKHNKVPEPYYALPFIGHLHLLSTKEPYFRTFSTMAEKYGSIFSLRLGCHNTLVVNNREIAKECLTKNDQVFASRPNVAAGRYLGYNNAILALAPYGDYWRNMRKISTIELLSSHRLEKLKHVRDLEIYSLLKNLYTFVKNSNGAIEVPISKFLDHMTFNIIVRMIAGKRFGGETINQEDSEAWRLRNAIKDTTYLSGVFVVADAIPFLSWFDFQGHIGFMKRTFKEMDFILDKWMHEHFRKRDEGQNGKCEDDFMDVLISMFEEHDEICGHKREVVIKATSMILILTASGSTAITLAWALSLLINHPKVLKQAQQELDNNIGKHKWVQESDIKHLKYLQSIIKETLRLYPPAPLTGIREATDDCHVAGYHIPKGTRMLINLWELQRDPQIWSNPNEFQPERFHNTFDHDFQNQDFGYVPFSYGRRSCAGATFGLQVLHLTLARLIQGFDIYTKEGGVVDMIEGVGLALPKENPLEVMLQPRLPLDLYENL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00301 531 Pfam Cytochrome P450 47 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PANTHER CYTOCHROME P450 82C3-RELATED 11 529 - -
Tsu08g00301 531 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 PANTHER CYTOCHROME P450 82G1 11 529 - -
Tsu08g00301 531 Gene3D Cytochrome P450 40 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 SUPERFAMILY Cytochrome P450 47 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00301 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00301 Tsu-Chr8 2876070 2879333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00301 46 528 Cytochrome P450 AT4G31970 46.680 8.09e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00301 K17961 - gmx:100787489 758.059