Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00296 ATGTCCAAGCATAATGTTCTTTTATTCTTCTATGTGTTTGTGGTTTTGTtgtcaataaattttttagtgtGTGATGGCACTGAAATGGATGATGAAAGTAGTAAACTTTACATCGTATACATGGGTTCACTTCCTACAGGAGCATCATATTTTTCAACCTATCATCATCTCAGCATGTTGCAACAAGTCATTGATGGTGACGACGTAGAAAATCGCTTAGTTCGAAGTTACAAGAGGAGTTTTAATGGTTTTGCTGCCATACTCAATGATCAACAGAGGGAGAAACTTCTCGGCATGAGAGGCGTGCTCTCTGTTTTTCCAAGTCAAAAGTTTCACCTACAAACTACAAGGTCGTGGGACTTCCTCGGACTTCCTCAATCAATCGAAAGAGATCGAACCATTGAGAGCAATTTGGTGATTGGAGTTATAGACACCGGAATATCGCCAGAATCTGAAAGTTTCAATGACGAAGGTCTTGGTCCCATTCCGAAAAAGTGGAAGGGAGTTTGTGCAGGTGGTGGTAACTTTAGCTGCAATAACAAGATCATTGGTGCACGATCTTACACTGTTGGGGAAGACGGTGCAAGAGATTATGTTGGTCATGGAACCCACACAGCATCAACAGCAAGTGGAAGAGAGGTAAAAGATGTAAGCTTTTATGGTCTTGCAAAAGGCATTGCAAGAGGTGGAGTTCCATCTTCAAGGATTTCTGTATACAAAATATGCAAAGCAGATGGTAGTTGCAGTGGAAAGGATATTTTAGCTGCATTTGATGATGCAATTGCTGATGGAGTTGACATCATCACAATCTCAATTGGGGCCCCAAATGCCATTGAATTTTTGAAAGATGTTATTGCCATTGGTTCTTTTCATGCCATGGAGAAAGGAATACTGACAATACAGGCGGCCGGAAATTATGGTCCTTTCCCAAGTAGTGTTTCTAGTGTAGCACCTTGGTTATTTAGTGTTGCTGCAACTAGCATTGATCGTCAATTTATTGATAAGCTCGTTCTTGGAAATGGAAAGACATTGATTGGCAAGTCAATTAATATTGTCCCCTCAAATGGAACAAAATTTCCAATAGCTGTGCGTAATGCTAAAGCTTGCCCAGGTACAGGTACATATGCAACTCCTGAAATGTGTGCTTGTATGGACAAAAATATGGTGAGGGGTAAGCTTGTTTTGTGTGGGGTACAAGGGGGTGAAGAATTGGCATATGAGAATGGTGCAATTGGTTCAATCATTCAAGTTACACATTCTCGAAATGAAGTTTCTGATGTCACTCTAAAGCCTTCACTTAACTTGGATCCAGAAGACTATGTTCGTGTTCAATCTTACACGAATTCCACTAAATACCCTGTAGCTGAAATCTTGAAGAGTGAGATCTTCCATGACAACAATGCTCCTAGAATTGCCAGTTTCTCTTCTCGTGGCCCAAATTCTTTGGTTCCAGAAATTATGAAACCAGATATAAGTGCCCCGGGAGTGGATATCTTGGCTGCATATTCACCTCTAGCGCCACCCTCAGATTATTCGGGAGACAAGAGAAAGGTCAAATACAACATAATATCTGGAACTTCTATGGCATGTCCCCATGCTGCTGGAGTTGCTGCATATGTAAAATCACTACATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACAGCGAAACCAATAAATGGCACTTATAATAATATTGCAGGTGAGTTTGCTTATGGATCTGGGAATGTCAATCCACATCAAGCTGTTCACCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGCAAATGCTTTGTAATTTTGGTTATGAtgctaacaaaattaaacagaTCAGTGGAGATAAGTCAAGTTGTCATGGAGCTTCCAACAGATCATTTGTGAAAGATATAAACTATCCTGCAGTGGTGATTCCTATTGAGCCTGGTAAACAATTCAATGTCAAGATTCATAGAACAGTTACAAATGTTGGCTCTCCCAACTCCAGCTACAGGGCTACTATCATACCAATTCAGAATATCAAGATTAGTGTGAAACCAAATGTTCTCTCattcaaatcattaaaggaGAAACAATCATTTGTTGTCACTGTTATTGGGAGAGCACCATCAAATCAAACTGCGTTTTCCTCCTCACTTGTTTGGTCAGATGGCACCCACAATGTGAAGAGCCCAATCATTCTGCAAACACTATCCTAA 2214 0.3975 MSKHNVLLFFYVFVVLLSINFLVCDGTEMDDESSKLYIVYMGSLPTGASYFSTYHHLSMLQQVIDGDDVENRLVRSYKRSFNGFAAILNDQQREKLLGMRGVLSVFPSQKFHLQTTRSWDFLGLPQSIERDRTIESNLVIGVIDTGISPESESFNDEGLGPIPKKWKGVCAGGGNFSCNNKIIGARSYTVGEDGARDYVGHGTHTASTASGREVKDVSFYGLAKGIARGGVPSSRISVYKICKADGSCSGKDILAAFDDAIADGVDIITISIGAPNAIEFLKDVIAIGSFHAMEKGILTIQAAGNYGPFPSSVSSVAPWLFSVAATSIDRQFIDKLVLGNGKTLIGKSINIVPSNGTKFPIAVRNAKACPGTGTYATPEMCACMDKNMVRGKLVLCGVQGGEELAYENGAIGSIIQVTHSRNEVSDVTLKPSLNLDPEDYVRVQSYTNSTKYPVAEILKSEIFHDNNAPRIASFSSRGPNSLVPEIMKPDISAPGVDILAAYSPLAPPSDYSGDKRKVKYNIISGTSMACPHAAGVAAYVKSLHPDWSPAAIKSAIMTTAKPINGTYNNIAGEFAYGSGNVNPHQAVHPGLVYDITKQDYVQMLCNFGYDANKIKQISGDKSSCHGASNRSFVKDINYPAVVIPIEPGKQFNVKIHRTVTNVGSPNSSYRATIIPIQNIKISVKPNVLSFKSLKEKQSFVVTVIGRAPSNQTAFSSSLVWSDGTHNVKSPIILQTLS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00296 737 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
Tsu08g00296 737 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Tsu08g00296 737 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Tsu08g00296 737 CDD Peptidases_S8_3 111 560 IPR034197 -
Tsu08g00296 737 ProSiteProfiles Serine proteases, subtilase domain profile. 118 587 - -
Tsu08g00296 737 Gene3D Peptidase S8/S53 domain 138 600 IPR036852 GO:0004252|GO:0006508
Tsu08g00296 737 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
Tsu08g00296 737 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Tsu08g00296 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 114 IPR037045 -
Tsu08g00296 737 Pfam Subtilase family 136 577 IPR000209 GO:0006508|GO:0008236
Tsu08g00296 737 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 36 734 - -
Tsu08g00296 737 CDD PA_subtilisin_like 336 457 - -
Tsu08g00296 737 Gene3D - 329 464 - -
Tsu08g00296 737 Pfam Fibronectin type-III domain 635 732 IPR041469 -
Tsu08g00296 737 SUPERFAMILY Subtilisin-like 10 616 IPR036852 GO:0004252|GO:0006508
Tsu08g00296 737 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 734 IPR045051 -
Tsu08g00296 737 Gene3D - 604 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00296 Tsu-Chr8 2825170 2827649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00296 30 737 Subtilisin-like Serine Gene Family AT5G59100 51.393 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00296 - - mtr:MTR_1g006990 1032.71