Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00287 ATGAAGCCATTCtcaatttttctcattttcatcCTCTTCTTCATTGCATCAGCATTAGTTTCTGCTAAGAAAGAGGCTGATGTAACGGAGTTGCAGATTGGCGTTAAgTATAAACCAGCATCATGTGAAGTTCAGGCACACAAAGGTGATAAAGTGAAAGTACACTATCGGGGAAAACTCACCGACGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAGTCCAATTGATTTTGAGCTTGGTGGTGGTCAAGTGATCAAAGGATGGGACCAAGGATTATTGGGAATGTGCCTCGGTGAGAAGCGAAAATTGAAAATACCAGCAAAACTTGGTTATGGAGAACAGGGCTCCCCACCCACTATTCCAGGTGGTGCAACACTTATATTTGACACTGAGCTTGTGGGAGTGAACGACAAAAGTTTAAGCGGGGAAAAATCTGAACTTTAG 447 0.4049 MKPFSIFLIFILFFIASALVSAKKEADVTELQIGVKYKPASCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGGGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSGEKSEL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00287 148 Gene3D - 16 147 IPR046357 GO:0003755
Tsu08g00287 148 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 134 IPR001179 GO:0003755
Tsu08g00287 148 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Tsu08g00287 148 PANTHER - 4 146 IPR044609 GO:0000413|GO:0003755|GO:0061077
Tsu08g00287 148 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-2 4 146 - -
Tsu08g00287 148 SUPERFAMILY FKBP-like 36 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00287 Tsu-Chr8 2766411 2769167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00287 47 134 Calmodulin-binding Proteins AT3G25230 60.227 3.82e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00287 K09569 - gmx:100305479 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00913 04 8739992 8749025 Tsu08g00287 08 2766411 2769167 PCT