Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00281 ATGCTTCGATTTCTTTCAAATGGGTCAAATCTTTTTCAGCATTTTTCATTCACCCAAGTAATTATAAAATCCTTGCCAATTTTCACTCCCGCCACCTATTCGACGAAAGTCCCAGCCGAAAATGAGGTTGAATTGCAAAACGTTAGTGACAATTGGAAGGATACTACTGAAGTTTTGAGTAAATGGggttgtgatgatgatgatttggtgaGAATATTCACTCGTTGCCCTTCATTACGCAATGCGGATCCTTCTCAGGTTCAGTCAAAACTTTCCTTGCTTAGTGACTTGGGTTTAGGATCAGCTGAACTTGTGAAGATTATCAATTGTAGGCCTCGATTTTTCAGGACTCGGATGAATGTTAAATTCGACAAGAGGCTTGACTCTCTTATGACATTGTTTGAGTCAAGGGAAATGCTTCATAAGGCCATTGCAAGAAACCCTTCATTGCTATGTGAAAATAGCTATAACATTGAAAGTATTGTTGCACAGTATGAAGAGTTGGGTGTGACGAAGAAGGACTTGGTTCAAATGCTGATTTTGCGGCCGACTATTATGTCGAGGACTTCCTTTGACGATGAGAAGACTGAATATATAAGTAGGACCGGGGTTTCTAAGGATGCAAAATTGTACAAATATGTGGTGACATTAATAGGCATCTCTCGCCTGGAAACGATTCGCGAAAAGGTGTTGAATTTTACAAAGTTTGGTTTTTCGGAGGATGAGATACTTCGTCTTTTTGGGAAGTGTCCTCATATTTTGACACTGTCAACTGATAAGGTTCAGAGGAACATGACTTTCGTTTTAGGTACAATGAAGCTTGAAGCTAAGATAATCTTTAAGTGCCCATATGTCTTGTTTGCAAATATGGAGACTATTTTGAAGCCACGAGCGCTTATAGCATTGAAGATACAAGATATGGATTCTAAGTTGAAAACACCCTCAATACTCACAGCTTTGAGGATGTCAGAGGAGaggtttttaaaattgtttgtcAAATGCCATGACAAGGAAATTGCGGATGAATTAATGGAATTTTATAAAAGGACAAAAGAGTCTAAGAGATTAGCAGCTTCATCAAGGAAATTTACTACTAGAGGATTCCCTTTCTGA 1113 0.372 MLRFLSNGSNLFQHFSFTQVIIKSLPIFTPATYSTKVPAENEVELQNVSDNWKDTTEVLSKWGCDDDDLVRIFTRCPSLRNADPSQVQSKLSLLSDLGLGSAELVKIINCRPRFFRTRMNVKFDKRLDSLMTLFESREMLHKAIARNPSLLCENSYNIESIVAQYEELGVTKKDLVQMLILRPTIMSRTSFDDEKTEYISRTGVSKDAKLYKYVVTLIGISRLETIREKVLNFTKFGFSEDEILRLFGKCPHILTLSTDKVQRNMTFVLGTMKLEAKIIFKCPYVLFANMETILKPRALIALKIQDMDSKLKTPSILTALRMSEERFLKLFVKCHDKEIADELMEFYKRTKESKRLAASSRKFTTRGFPF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00281 370 Pfam mTERF 157 328 IPR003690 GO:0003690|GO:0006355
Tsu08g00281 370 Pfam mTERF 57 186 IPR003690 GO:0003690|GO:0006355
Tsu08g00281 370 Pfam mTERF 43 152 IPR003690 GO:0003690|GO:0006355
Tsu08g00281 370 Gene3D Transcription termination factor 3, mitochondrial 136 348 IPR038538 -
Tsu08g00281 370 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 18 370 - -
Tsu08g00281 370 PANTHER CGI-12 PROTEIN-RELATED 18 370 IPR003690 GO:0003690|GO:0006355
Tsu08g00281 370 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Tsu08g00281 370 SMART mt_12 70 100 IPR003690 GO:0003690|GO:0006355
Tsu08g00281 370 SMART mt_12 141 171 IPR003690 GO:0003690|GO:0006355
Tsu08g00281 370 SMART mt_12 105 137 IPR003690 GO:0003690|GO:0006355
Tsu08g00281 370 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Tsu08g00281 370 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu08g00281 mTERF 4.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00281 K15032 - gmx:100799629 461.84