Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00279 ATGGAATGCCAAACAACTTATGGCCAGGTGGTTTTACCCGTATTTTACGATGTTGACCCATCAGTTGTTCGTAAGCAGAAGGGTGATTTTGGGGAAGCCTTGAAAGTTActgcaacaaaaaaatactCAGATAATCGACAAAAGGAAGTTATCTTGTCCGAGTGGAGGAACGCACTCAGTGCAGCTACAAATCTATCTGGCTGGGATGCCAACAATTACAGGACGGAAGGTGAACTGATACAGAGTATTCTTGCATGGATTTTGGTACAAGTAGATGTCTCGTTGTTGTCTATTACTGAATATCCCATTGGACTGGAATCCCGGGTGCAAAAGATTACCAAGTTTATTAATGATCAATCAAGCAAAGTCTGTATGATAGGGATATGGGGAATGGGTGGATCTGGGAAAACAACCACGGCCAAAGCTATCTACAATCGAATCCATCGTAGATTCCAGGGTAGAACAAGTTTCATTGGAAGTATTCGAGAAGTTTGTGATGATAATAGTAAAGGGATTATTCATTTGCAAGAACAGCTTCTTTCAGATGTCCTGAAAATTCAGCAGAAGATTCATAGCATTGCATTAGGGATAACTAAGATTGAGACAAGACTTCGGGGGCAAAAGGCTTTCATCGTACTCGATGATGTGTCCAAGTCTGAGCAATTAAAAGCCCTGTGTGGAAATCCTAAGTTGTTTGGTTCAGGAAGTGTATTGATTATTACAACTAGAGATGTACGCCTACTCAATTCACTTAAAGTTGACTATATCTTCACAATGACGGAAATGGACAAAAATCAGTCCCTTGAGCTTTTCAGCTTGCATGCGTTTAGGCAAAAGAGTCCTAGGAAAGATTTTAACAAACTCTCTAGAAATGTAGTTGCTTACTGTGGAGGATTACCCCTGGCTCTTGAAGTCCTTGGATCTTACTTATCTGAGAGGACGGAACAAGAATGGAGAAGTGCACTGTCAAAATTAGAGAAAATTCCCAACGATCAAGTGCAACAGAAACTGAGAATCAGCTACGATGGTTTAGAGGATTATACGGAAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAGCTGATGTTACAGAGATACTTAATGGCTGTGGACTTCATGCTGATATTGGAATAGCTGTCCTCATAGAGCGCAGCCTCATAAGAGTTGAAAAGAATAATAAGCTTCAAATGCATGATTTGCTACGAGACATGGGAAGAGCAATTGTTGGCGAAAGTTCAGCAAAAGAGCCTGCAAAGCACAGTCGAGTGTGGTTCCGTGAGGATGTACTGGATGTATTGTCAAAAAATACTGGAACAGAAACTGTTGAGGGATTGATTTTTAAGTTGCAAAGAACAGCTAGAATTACATTTAGTACTAATGCTTTCCAGGAGATGAAAAAGCTGAGGCTTTTAAAACTTGATGGTGTTGACCTCATCGGAGATTATGGGTTAATTTCCAAACAATTGAGATGGTTTGATTGGCAACGATCTACTGTCAACTATATACCAAATGACTTTGAACAAGGAAATCTAGTtgtttttgaattaaaatatagCAATGTTAAACAAGTTTGGATGGAGACCAAGttgTTGGAGAAGCTAAAAGTACTCAATCTCAGTCATTCCAAGTACTTGAGAAGCACCCCTGACTTTTCAAAATTACCAAATCTAGAAAAACTCCTTATGAAGGATTGTCCAAGTTTGTCTGAGGTACACCCGTCCATTGGAGATCTCAAGAATCTCCTTCTGATAAATTTGAGGGACTGTACAAGTCTTGGCAATCTCCCAAGAGAGATCTATCAATTGATATCAGTGAAAACTCTCATTCTTTCTGGTTGTTCTAATATTGATAAATTGGAAGAAGATATATTGCAAATGGAATCCTTGACTTCACTAATTGCAACAAATACTGGTGTCAAACAAATCCCCTTTTCAATAGTAAGTtcaaaaaacattgcatatatATCCCTATGTGGATATAAAGGATTGTCATGTGATATTTTTCCTTCTCTCATTTGTTCTTGGATGTCACCAACCAGAAATTCCCTACCCCGTGTTTCTTCATTTGGAGGCATTTCATTGTCTCTTGTTTCCTTGGATTCAGTAGGGAGTAATAATATGGGCTATCAATCACTAAGTAACATCCTTACAGAACTTAGAAGCATTCGGGTTCAATGTCACTCAGAGAATCAACTAACTCAAGAATTAAGAAGATTTCTTGATGATTTATATGCTTTGAATTTTATTGAGTTGGAAACAACATCACATGGAGCACAAAGCTCAAACCTTTGCTTGAGATCACTTGTGATTGGAATGGGAAGTTCCCAAATAGTCATGGATACTCTTGGGAAGAGCTTATCACAGGGATTGTCAAGCAATTCTAGTGATTCTTTCCTTCCGGGTAACAATTGTCCTTCTTGGTTAGCCTATAAATGCGAAGGACCTTCGGTTCATTTCAAAGTGCCTGAGAATAGTGATCGATGCATAAGGGGAATAACTTTGTGTGTTCTTTACTCATCAAAACTTGAAAACCTGGCAAATGAATGTCTCACTAGTGTCTTGATCATTAATTACACAAAACTCACTATTCAGATTTACAAGCGAGACACAATAATGTCGTTTAATGATGAAGATTGGCAAGGCATGGTATCAAAATTAGGAGTTGGTGACAATGTGGAGATTTTTGTAGCTATTGGGCATGGATTGACTGTTAAGGAGACGGCTGTCTATCTAATATATGATCCATCTACAGACGCAAAAATGGAGTCAGAGCCATCACCTGCAGAGGAATTACAAAGGAATTGCCTGAAGAGGAAGTACAACCGTCATCTGAGATGA 2853 0.3814 MECQTTYGQVVLPVFYDVDPSVVRKQKGDFGEALKVTATKKYSDNRQKEVILSEWRNALSAATNLSGWDANNYRTEGELIQSILAWILVQVDVSLLSITEYPIGLESRVQKITKFINDQSSKVCMIGIWGMGGSGKTTTAKAIYNRIHRRFQGRTSFIGSIREVCDDNSKGIIHLQEQLLSDVLKIQQKIHSIALGITKIETRLRGQKAFIVLDDVSKSEQLKALCGNPKLFGSGSVLIITTRDVRLLNSLKVDYIFTMTEMDKNQSLELFSLHAFRQKSPRKDFNKLSRNVVAYCGGLPLALEVLGSYLSERTEQEWRSALSKLEKIPNDQVQQKLRISYDGLEDYTEKDIFLDICCFFIGKNRADVTEILNGCGLHADIGIAVLIERSLIRVEKNNKLQMHDLLRDMGRAIVGESSAKEPAKHSRVWFREDVLDVLSKNTGTETVEGLIFKLQRTARITFSTNAFQEMKKLRLLKLDGVDLIGDYGLISKQLRWFDWQRSTVNYIPNDFEQGNLVVFELKYSNVKQVWMETKLLEKLKVLNLSHSKYLRSTPDFSKLPNLEKLLMKDCPSLSEVHPSIGDLKNLLLINLRDCTSLGNLPREIYQLISVKTLILSGCSNIDKLEEDILQMESLTSLIATNTGVKQIPFSIVSSKNIAYISLCGYKGLSCDIFPSLICSWMSPTRNSLPRVSSFGGISLSLVSLDSVGSNNMGYQSLSNILTELRSIRVQCHSENQLTQELRRFLDDLYALNFIELETTSHGAQSSNLCLRSLVIGMGSSQIVMDTLGKSLSQGLSSNSSDSFLPGNNCPSWLAYKCEGPSVHFKVPENSDRCIRGITLCVLYSSKLENLANECLTSVLIINYTKLTIQIYKRDTIMSFNDEDWQGMVSKLGVGDNVEIFVAIGHGLTVKETAVYLIYDPSTDAKMESEPSPAEELQRNCLKRKYNRHLR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00279 950 Gene3D - 94 256 IPR027417 -
Tsu08g00279 950 Gene3D - 261 345 IPR042197 -
Tsu08g00279 950 Gene3D - 1 93 IPR035897 -
Tsu08g00279 950 Pfam NB-ARC domain 106 335 IPR002182 GO:0043531
Tsu08g00279 950 PRINTS Disease resistance protein signature 125 140 - -
Tsu08g00279 950 PRINTS Disease resistance protein signature 534 550 - -
Tsu08g00279 950 PRINTS Disease resistance protein signature 203 217 - -
Tsu08g00279 950 PRINTS Disease resistance protein signature 296 310 - -
Tsu08g00279 950 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 917 - -
Tsu08g00279 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 356 IPR027417 -
Tsu08g00279 950 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 917 IPR044974 GO:0006952
Tsu08g00279 950 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 68 IPR035897 -
Tsu08g00279 950 Gene3D Ribonuclease Inhibitor 437 776 IPR032675 -
Tsu08g00279 950 ProSiteProfiles TIR domain profile. 1 91 IPR000157 GO:0007165
Tsu08g00279 950 Pfam TIR domain 1 87 IPR000157 GO:0007165
Tsu08g00279 950 SUPERFAMILY L domain-like 401 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00279 Tsu-Chr8 2618755 2625494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00279 1 651 WRKY Transcription Factor Family AT4G12020 29.491 4.35e-66 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00279 - - mtr:MTR_8g011850 1156.35