Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00277 ATGTCATCTTCCTCCGATCATCCTTCATACATCCACGACGTGTTCTTAAATTTCCGAGGGGAGGATACTCGTGACAAATTGATTTCTCATCTCTATGCCGCACTATCAAACGCGGGAATCAACACTTTTCTCGACAAAATGAACCTTAAAATGGGAGATGAATTGCCAGAAATATTGGACGCAATAGAAGTGTCTCGTATTTCTATTATTGTTTTCTCCAAAGGATATACTCAATCTAGTTGGTGTCTTTCTGAACTTGTAAAAATTATGGAATGCCACCGTATTCATGATCAACTTGTTGTACCTTTATTTTATGATGTTGACCCATCTGTTGTTCGTCATCAGAATGGTGATTTTGGAAAAGCTTTAGAAGCAAATGCAAACAAACAGTACTTGCGAAAAGATCTCTTGTCCGATTGGAGGAATGCACTGATTAAAGCTGCAAATCTATCCGGCTGGGATGCCAACAAGTCCAGGAATGAATCAAAACTAGTGAAGCAAATTGTTCGAGATGTTTTGGCAAAACTAGACAACACATTTCTGTCTATTACCGAATTTCCAGTTGGATTGGAATCCCATGTGCAAAATGTGACTGACTGGATTGATGATCAGTCTAACAAAGTTTGTATGGTGGGGATATGGGGAATGGGGGGATCTGGCAAAACAACCACAGCCAAAGCTATCTACAATCGAATCCATCGTAAATTCGAGGGTAGAACAAGTTTCATTGTAAGTATTCGAGAGATTTGTGAAAATGATAGTAGGGGGATCATTCATATACAACAACAACTTCTTTCTGATGTTTTGAAAACAAATGAGAAGATACATCATAGAAGCATTGAAATGGGGATAACTAGGATCAGGAAAACACTTCGGGGAAAAAAGGCCTTTGTCGTACTCGATGATGTGACCAAGTCTGAGCAATTAAAAGCCATGTGCGCAAATTCTAAGTTGTTTGGTTTAGGAAGTGTAATAATTATTACAACTAGAGATGCACGCCTTCTCAATTCACTTGGTGTTAAACACGTGTTAACCATGACGGAAATGGACGAAAACCAATCCCTTGAACTTTTTAGTTGGCATGCTTTTCGCCAACCAAGTCCTAGAGAAGATTTTAGCGAACTCTCTAGAAATGTAGTTGCTTATTGTGGAGGATTACCTCTAGCACTTGAAGTCCTTGGATCATACTTAACTGGGAGGACGGAACAAGAATGGAGAAGTGCACTATCAAAATTAGAGAAAATTCCCAACGATCAAGTGCAACAGAAACTGAGAATCAGCTACGATGGTTTAGAAGATTATACATTAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAACTGATGTTACAGAGATACTTAATGATTGTGGATTTTATGCTGATATTGGAATAGCTGTACTCATAGAGCGGAGCCTCGTAAAAGTTGAAAAGAAGAAtaacaagcttcaaattcatGATTTGCTACGGGACATGGGAAGAGCAATTGTTGGAGAAAGTTCAGCAAAAGAACCCAGAAAGCATAGTCGATTGTGGTTTCCCGATGATGTGGTggaaattttgacaaaaaatactGGAACAGAAACTATAGAAGGATTGGTTCTGAAGTCACAAAGAATTGACAAGTATTGTTTCAGTACTAATTCTTTCAAGAAGATGAACAAACTCAGACTCTTACAACTTGATTGTGTTGACCTCGCTGGGGATTTTCGGTATCTCTCCAAACAACTTAGATGGGTCAATTGGCAACGGTCTACCTTCAACTATATACCTAATGACTTTGATTTGGGAAATCTCATTGTTTTCGAATTGAAGTATAGCAATCTTGAACAGGTTTGGAAGGAAAACAAGTTGTTGCAGAAGCTAAAAATTCTCAATCTTAGTCATTCCAAGCACTTGAAAAGCACTCCtgatttttcaaaattaccGAACCTAGAAAAGCTCATTATGAAGGATTGTCAAAGTTTGTCCGAGGTACACTCGTCCATTGGAGATCTCAAGAATATTCTTcttataaatttgaaggacTGTACAAGTCTTGGCAATCTCCCTATAGAGATATATCAATTGGCATCGGTGAAAACTCTGATCCTTTCTGGTTGTTCGAATATTGACAAATTGGAAGAAGATATAGGGAAAATGGAATCCTTGACAACTATAGCTGCAAAAAATACTGGTGTCAAACGCGTGCCGGTTTCAATAGTTAGATCAAAAAGCATTAGATATATATCACTATGTGGATATGAAGGATTATCTCGTGATGTTTTTCCTTCTATCATTAGGTCCTGGATGTCACCAACAATGAATTCCTTAGCACATATTCCCCCTTTTGGTGGCATGTCAACGTCTCTTGTTTCCTTGAATGTAGATAGTAGAAATTTTGGTTTGGTCTATCAATCACCATTACTTGGTAGCGATTCAAAACTTAGAAGTATTTCGATACAATGTGACTCAGAGATTCAACTGAAACAAGAATTCAAAAGATTTCTTGATGATCTATATGGTGCAGGTCTTAATGAAGTGGGAACATCCCATGCATCACAAATTTCAGATATTTCCTTGAGATCTCTTTTGATTCGAATTGGAAGTTGCCACATTGTTATCGACAATCTTGGGAAGAGCTTATCACAGGGATTGGCAACCAATTCTAGTGATTCTTTCCTTCTGAGTGACAATTATCCTTCTTGGTTAGCCTATAAATGCGCAGGACCTTCGGTACTTTTTCAAGTGCCTGATGAGGATAGTGATCGTTGCATGAAAGGAATAACTTTATGTGTTCTTTATTCGTCAACACATGAAAACTTGGCAACTGAATGTCTCCCTAGTATTTTGATCattaattacacaaaatttACTATCCAGATTTACAAGCGAGACATAGTAATGTCGTTTAATGATGAAGATTGGCAAAGTGTATTATCAAATTTAGGATTTGGTGACAATGTGGAGATTTTTATAGCTATTGGGCACGGGTTTGCTGTTAAGGAGACGACTGTCTATCTAATATATGAACAGTCAAGTGATATGGAAGTGCAACCATCTTTTAGTAAGCCACCTATTAGATATGTACATGTCAGGCGCAGGCGCAAATTAAATTAG 3114 0.3693 MSSSSDHPSYIHDVFLNFRGEDTRDKLISHLYAALSNAGINTFLDKMNLKMGDELPEILDAIEVSRISIIVFSKGYTQSSWCLSELVKIMECHRIHDQLVVPLFYDVDPSVVRHQNGDFGKALEANANKQYLRKDLLSDWRNALIKAANLSGWDANKSRNESKLVKQIVRDVLAKLDNTFLSITEFPVGLESHVQNVTDWIDDQSNKVCMVGIWGMGGSGKTTTAKAIYNRIHRKFEGRTSFIVSIREICENDSRGIIHIQQQLLSDVLKTNEKIHHRSIEMGITRIRKTLRGKKAFVVLDDVTKSEQLKAMCANSKLFGLGSVIIITTRDARLLNSLGVKHVLTMTEMDENQSLELFSWHAFRQPSPREDFSELSRNVVAYCGGLPLALEVLGSYLTGRTEQEWRSALSKLEKIPNDQVQQKLRISYDGLEDYTLKDIFLDICCFFIGKNRTDVTEILNDCGFYADIGIAVLIERSLVKVEKKNNKLQIHDLLRDMGRAIVGESSAKEPRKHSRLWFPDDVVEILTKNTGTETIEGLVLKSQRIDKYCFSTNSFKKMNKLRLLQLDCVDLAGDFRYLSKQLRWVNWQRSTFNYIPNDFDLGNLIVFELKYSNLEQVWKENKLLQKLKILNLSHSKHLKSTPDFSKLPNLEKLIMKDCQSLSEVHSSIGDLKNILLINLKDCTSLGNLPIEIYQLASVKTLILSGCSNIDKLEEDIGKMESLTTIAAKNTGVKRVPVSIVRSKSIRYISLCGYEGLSRDVFPSIIRSWMSPTMNSLAHIPPFGGMSTSLVSLNVDSRNFGLVYQSPLLGSDSKLRSISIQCDSEIQLKQEFKRFLDDLYGAGLNEVGTSHASQISDISLRSLLIRIGSCHIVIDNLGKSLSQGLATNSSDSFLLSDNYPSWLAYKCAGPSVLFQVPDEDSDRCMKGITLCVLYSSTHENLATECLPSILIINYTKFTIQIYKRDIVMSFNDEDWQSVLSNLGFGDNVEIFIAIGHGFAVKETTVYLIYEQSSDMEVQPSFSKPPIRYVHVRRRRKLN 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00277 1037 Gene3D Ribonuclease Inhibitor 546 860 IPR032675 -
Tsu08g00277 1037 Gene3D - 350 432 IPR042197 -
Tsu08g00277 1037 Pfam NB-ARC domain 191 422 IPR002182 GO:0043531
Tsu08g00277 1037 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 1007 - -
Tsu08g00277 1037 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Tsu08g00277 1037 SMART till_3 11 150 IPR000157 GO:0007165
Tsu08g00277 1037 Gene3D - 189 349 IPR027417 -
Tsu08g00277 1037 Gene3D - 7 184 IPR035897 -
Tsu08g00277 1037 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 1007 IPR044974 GO:0006952
Tsu08g00277 1037 Pfam TIR domain 12 183 IPR000157 GO:0007165
Tsu08g00277 1037 SUPERFAMILY L domain-like 490 820 - -
Tsu08g00277 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 443 IPR027417 -
Tsu08g00277 1037 PRINTS Disease resistance protein signature 383 397 - -
Tsu08g00277 1037 PRINTS Disease resistance protein signature 622 638 - -
Tsu08g00277 1037 PRINTS Disease resistance protein signature 290 304 - -
Tsu08g00277 1037 PRINTS Disease resistance protein signature 210 225 - -
Tsu08g00277 1037 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 153 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00277 Tsu-Chr8 2593081 2598187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00277 1 739 WRKY Transcription Factor Family AT4G12020 28.816 4.70e-72 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00277 - - mtr:MTR_8g011850 1239.94