Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00273 AATATATTGGAACAGAAAATGTAGAGGGATTGGTTGTGGAGTCTCAAGGACCTGACAGAGTTTCCTTCAATACTGATTCTttcaagaagatgaagaacctCAGGCTTCTACAACTTGATTGTGTTGACCTCACTGGAGATTATGGAAACCTTTCTAAAAAACTGAGATGGGTTTGTTGGCAAGGATTTACCTTCAACTATATACCTGATGACTTTCATCAAGTAAATCTAGTTGTTTTTGAATTAACACACagcaaaattaaaaaagtatgGAATGAAACCAAGGTGCTGGTGAATCTAAAAGTTCTCAATCTCAGTCATTCAAGGACTGTACAGATTGACAAGCTGGAAGAAGACATAAAGCAGATGAAATCCTTGACAACACTAATTGCAAAAAATACAGCTATTAAAGAAATTCCCTTTTCAATAGTAAGACACGAGGAAATTCTGAATCAATCAGAGGATGCTGATGAGAAATGGGCTTTAGTGAATGATGTTGATGTCAACAGAagGATGGTCGAGCAAATTCCATATGCTGTTGCTGAAAGCCTCTTTAatagGTTGACTTCTACAACCTTTCGTGAACATGGACGGATTTATGGTGTTATAGAAGAGTTGGAAAGGCTTAAGAACAATGTTGAATGCATAAGAGCTGTGCTCCCTGATGCCGAGAAGAAACAGGAACAAGATTGTGTTATACAAGATTGGATAACAAGCCTCAAGGATGTGCTTCATCTTGCAGATGACTTGCTTGATGAATTTACTATTGAAGGTATGAGATATGAAGTGGATGCATGTGATAAGAACCAAGTGACATGGGTTCATTCATCTGATTCAAGCCAAAATTTTCTAAACCAAAAAGTAGctcctgaaattgaaaaaatacaaaaaaagttTGATGATGTGCTAGAAGAAATGGATAAGTTGAAATTAAGCCCAAAAGATGCGGTGGTTAAGCAAACTGACAGTTTAAGGAAAAAATCTAATTCTTTTTTGTTAGAATCTGATATCACTGGTAGAGAAGATGATAAAGAGGAGATTATAAATCTCTTAAGGCAACCACATAGAAATATCTTGTCAGTTGCTATTGTAGGTATTGGAGGCATAGGCAAGACAACTCTTGCTCAGTCCGTATATAATGATGTGGAAGTACAAAAtcattttgaaaagaaaatgtgGGTGTGTGTATCGAATAACTTTGATGTCAAGACTATTGTGAAGAAAATGCTGGAATCGTTAATGGATAGCAAGATTGATGATAAGTTATCATTTGAATACATACAACATAAACTTCATGAAAGCTTAACTGGTGAAAGGTACTTGTTAGTCTTGGATGACATTTGCAGTGCTACTCATAATAAATGGACTCAACTGAAAACTTATTTGATGTGTGGTGCTGGGGATAGTAGGGTTTTAATGACAACTCGTAGTAAAAGTGTGTCAAAGAGACTGCAAGCAAGTAACCTCCATGTTTTGAATGGTTTGACTCTAGAAGCATCTTGGAGTGTGTTAAAGAAAATTACATTTGGGAATGAAACCAGTGGTGTGAATCAAGAACTTGAATCAATTGGAaaacaaatagcaaaaaagTGCAAGGGAGTGCCACTAGCAATTAGAACACTGGGAGGCCTATTACAGAGTAAAAGTGAAGAAAGGGAATGGATCAGTGTCTTACAAGGCGACTTTTGGGATAAAGAAAGCATCATGTCGATCCTGAAATTCAGTTACCAAAGTTTGCCGCTTCAGTTGATACAATGTTTTGCTTTTTGCTCTTTGTTTCCTAAGGATTGGGAAATCGAGAAGGATATGTTGATTCAACTTTGGATGGCACAGGGTTATCTTGAATGCTCAGATGAAAAGCAACTCGTGGAAGATGTCGGTAACAAATTTGTGAAGATTTTCTTGATCAAGTCATTTTTCCAAGATGCAAAAGTGAGTGATGATGGTGATATAGTTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAATCCAAGTAGCTGGCAATGATTGTTGTTACTTGGATAGTGAGGCAACAAGATGTGTACAAAGACCCATGCACGTATCTTTGGAACCCAATGCAGTTCATTTGTTGGCCTCATTAGATGCAAGCAGGTTGCGAACTTTGATTTTATTGTCTTCCAATGAGGAGGAGGAATTGAATGGGGATGAATTGTcagttatttttaatttcaaacacTTACGTGTCTTGAAGCTGTCTAATTGTTCATTAAGCAGGTTGTATGGTTCAATTGAAAACATGAAACATTTAAGGTATCTTTACTTAACGCACTGCAGAGGTCTGGGAAGTCTTTACAAATCCATTAGCAGTCTTGTTTTCTTACAAACACTGATATTGACACCTAATGAAAAAATGGAGTTCTCTACCAAGGTTTTATCAAAATTAGTCAATATGAGACACCTTCACATCTCTGATTGGGAAACCTCCAGAGACGAGACACCATCTGGATTTGAAAATTTGAGCACTTTGCAGTATGAGGGGATGGTTTTTTCAAACTGGCTTTCTTCACTCACAAATATTGGTGAAATATCTTTCTTTTCATGTGGAACTCTCCAGTATCTCCCACCGTTGGAGCGTCTCCCATTCCTTAAGTCACTTCATATAAGTTTTCTTGAAGAACTGGAGTACATGTATTATGAACAAGATTTTACTTCAGCATTCTTTCCATCTTTAGAGAGCCTGACTTTGCAGTTTTGTTACAAGTTGAGGGGATGGTGTAGGATGGGAGACGATTTCAATAATACTACCTGTTCACAAAATCTCTCCTTGCCTCCCTTTCCTCGTCTCTCTCAATTATCAATCATAGGATGTCGGATCTTGACTTGCATGCCTGCCTATCCAGATGTCGAGAACAGATTGGAATTGTATAATTGTAGTGTGGAAACCTTAGTAGCCACACTGAACACAACTGCATTAGAAAGGATGAATGTCTTCCCTCCTCTTTCCATGCTCAAATCCTTGCACATTGACGGAGTGGGCCTGGATGTCAAAAGAATCCCAAAGGATTGGATGCAGAATCTTACTTCTCTCCAGCTTCTTCAAATTAATTGGTTTTCATGTCAAGAATTTCAGGAAATCAAACCTTGGTTTAAGGATGACCCCAAGTGTCTTCCTTCTCTACAAACAATTGCCTTTCATAATTGTGAAGACCTAGAGGCATTGCCAGATTGGATATGCAGCCTCTCATCGCTTCAGCATCTTAGGGTGTACGATTGCATAAATTTGGCATCAATGCCTGAAGGTATGCCCTGTCTAACCAACTTAGAGACCCTAGAAATCATTGGATGTCCCCTCTTAGCTGAAGAATGCCAAACACAAACAGATGAAACTTGGTCCAGAATTAGCCATGTCCCAAAGATAATCTTTTCATCTCTTCATTAA 3404 0.3678 YIGTENVEGLVVESQGPDRVSFNTDSFKKMKNLRLLQLDCVDLTGDYGNLSKKLRWVCWQGFTFNYIPDDFHQVNLVVFELTHSKIKKVWNETKVLVNLKVLNLSHSRTVQIDKLEEDIKQMKSLTTLIAKNTAIKEIPFSIVRHEEILNQSEDADEKWALVNDVDVNRRMVEQIPYAVAESLFNRLTSTTFREHGRIYGVIEELERLKNNVECIRAVLPDAEKKQEQDCVIQDWITSLKDVLHLADDLLDEFTIEGMRYEVDACDKNQVTWVHSSDSSQNFLNQKVAPEIEKIQKKFDDVLEEMDKLKLSPKDAVVKQTDSLRKKSNSFLLESDITGREDDKEEIINLLRQPHRNILSVAIVGIGGIGKTTLAQSVYNDVEVQNHFEKKMWVCVSNNFDVKTIVKKMLESLMDSKIDDKLSFEYIQHKLHESLTGERYLLVLDDICSATHNKWTQLKTYLMCGAGDSRVLMTTRSKSVSKRLQASNLHVLNGLTLEASWSVLKKITFGNETSGVNQELESIGKQIAKKCKGVPLAIRTLGGLLQSKSEEREWISVLQGDFWDKESIMSILKFSYQSLPLQLIQCFAFCSLFPKDWEIEKDMLIQLWMAQGYLECSDEKQLVEDVGNKFVKIFLIKSFFQDAKVSDDGDIVSFKMHDLMHDLAIQVAGNDCCYLDSEATRCVQRPMHVSLEPNAVHLLASLDASRLRTLILLSSNEEEELNGDELSVIFNFKHLRVLKLSNCSLSRLYGSIENMKHLRYLYLTHCRGLGSLYKSISSLVFLQTLILTPNEKMEFSTKVLSKLVNMRHLHISDWETSRDETPSGFENLSTLQYEGMVFSNWLSSLTNIGEISFFSCGTLQYLPPLERLPFLKSLHISFLEELEYMYYEQDFTSAFFPSLESLTLQFCYKLRGWCRMGDDFNNTTCSQNLSLPPFPRLSQLSIIGCRILTCMPAYPDVENRLELYNCSVETLVATLNTTALERMNVFPPLSMLKSLHIDGVGLDVKRIPKDWMQNLTSLQLLQINWFSCQEFQEIKPWFKDDPKCLPSLQTIAFHNCEDLEALPDWICSLSSLQHLRVYDCINLASMPEGMPCLTNLETLEIIGCPLLAEECQTQTDETWSRISHVPKIIFSSLH 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00273 1133 Gene3D Ribonuclease Inhibitor 958 1119 IPR032675 -
Tsu08g00273 1133 Gene3D Ribonuclease Inhibitor 695 956 IPR032675 -
Tsu08g00273 1133 Gene3D - 317 490 IPR027417 -
Tsu08g00273 1133 SUPERFAMILY RNI-like 895 1109 - -
Tsu08g00273 1133 Coils Coil 291 311 - -
Tsu08g00273 1133 SUPERFAMILY L domain-like 21 141 - -
Tsu08g00273 1133 PRINTS Disease resistance protein signature 359 374 - -
Tsu08g00273 1133 PRINTS Disease resistance protein signature 729 745 - -
Tsu08g00273 1133 PRINTS Disease resistance protein signature 433 447 - -
Tsu08g00273 1133 PRINTS Disease resistance protein signature 530 544 - -
Tsu08g00273 1133 Gene3D - 180 299 - -
Tsu08g00273 1133 SUPERFAMILY L domain-like 643 980 - -
Tsu08g00273 1133 Pfam Rx N-terminal domain 181 265 IPR041118 -
Tsu08g00273 1133 CDD RX-CC_like 177 301 IPR038005 -
Tsu08g00273 1133 CDD AAA 338 446 - -
Tsu08g00273 1133 PANTHER DISEASE RESISTANCE PROTEIN RP 196 1113 IPR044974 GO:0006952
Tsu08g00273 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 589 IPR027417 -
Tsu08g00273 1133 Pfam NB-ARC domain 339 575 IPR002182 GO:0043531
Tsu08g00273 1133 PANTHER OS08G0543100 PROTEIN 196 1113 - -
Tsu08g00273 1133 Gene3D Ribonuclease Inhibitor 4 154 IPR032675 -
Tsu08g00273 1133 Coils Coil 205 225 - -
Tsu08g00273 1133 Gene3D - 575 665 IPR036388 -
Tsu08g00273 1133 Gene3D - 494 574 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00273 Tsu-Chr8 2443357 2447658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00273 344 904 WRKY Transcription Factor Family AT5G45050 20.742 6.90e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00273 - - mtr:MTR_8g037220 1575.07