Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00267 ATGGAAAAGTGCATTAAGGAACTGATATACCTACAGCAGCTGTTGTATGAGGTGGAGGTGTGGGTCGACGGGACTGATTCATGGAGATGGACGCCAAATAGTATGGGGTTTTTTACGGATGGCGGTTACTACTTGAAAATTGCCTACAAAAGCAGCACTTCACTCGAGAGaAGGACTGAAGCTGAACTAGTTTCTGAAATTGTTGACAACGTTAAAACGCTAAAGACCAGATTCTTGAATATTACTCAATATCCGGTTGGATTGGATACCCGTGTGCAACAAGTGATTCGGATtcttgaaaatgaaaatcaatcaaacaaagtTTTCTTGATGGGGATCTGGGGTATGGGTGGATTGGGAAAAACAACAGTAGCCAAAGCTATCTACAACCAATTTCGTCACGAATTTAAGAATGGCAGTTTCATTGAGAATATTAGTGAAGCCTGTGAAAGAGGTGATGATGGGATTATTCATTTACAAGAACAACTTCTTGAAAATGTCCTTAAAACAAATGTGAAAATACACAGCATGGCATCTGGGATAACCACAATTGAGAAAATATTTAAGAGGAACAGGGCACTCATTGTACTCGACGACATTAGCACATTTGAGCAAGTAAAAGCCCTATGTGGAACTCGTGACAATTTTCAGTCGGGAAGTGTATTGATTGTTACATCCAGGGATGTAGGCATACTTAAGTTACTTGAAGTTGACTATGTCTTTAGGATAAAGGAAATGGACGAAAACCAGTCCCTTGAGCTCTTCAGCTGGCATGCTTTTAGACAACCACATCCAATTGAAGGATTCAGTGAACTCTCAAAAAACATAGCTGATTACTGTCGAGGATTACCACTGGCTCTTGAAGTCATTGGATCTTCCTTACGTAAAATGCCAAAACAACTTTGGGAAGTTACACTGTCAAAATTAAAGAGAATTCCCACTTACAAAGTGCAAAAGACACTGAAAATAAGCTATGATAGTTTAGATGAATGCCAAAAGGATATATTTCTTgacatttgttgtttctttattGGGAAGGACATAGCTTATGTTACTGAGATACTAAATGGTTGTGGACTTCATGCTGATATTGGAATAGCTGACCTCATTGATCAGAGCCTCATAAAAGTTGAAAAGAATAACAAACTTGGAATGCATAATCTGCTACGAGACATGGGGAGAGAGATCGTTCGTCAAACATCAGTACAAGATCCTGGGAAGCGTAGTCGATTGTGGTTTCACGAGGATGTACATGAGGTTTTGAATGAAAATACTGGAACAAAAACTGTGAAAGGATTGGTTTTGAAGTCGCAAAGCACCAGCAATGTTTGCATCAAAACTGATAGTTTCAAGGAGATGAAGAATTTGAGACTTTTACGGCTTGATCGTGTTGATCTTACTGGAGCTTTTGAGCTTCTTTCTAAAGAACTGAGATGGCTCCATTGGCAGAGATTTACTTGTGAATATATACCTGATGACTTTTATCTAGGAAACTTAGTTGTTTTTGAGTTAAAACACAGCAATATTAAACGAGTTTGGAATGAAACCAAGTTGATGGAGAAGCTGAAAATTCTTAATCTCAGTCATTCCAAGTACTTGACAAGCACTCCGGACTTTTCAAAATTACCAAATCTAGAAAAGCTCATTATGAAGGACTGTCCAAGCTTGTCTGAGGTACACTGGTCAATTGGAGATCTGAGGAATCTTCTTCTGATAAATTTGGAAGACTGTACAATTAGGAGCCTTCAACAACTCAGAACTGTTTGGATACAATGCCACTCAGAGAATCAACTAAGtcaagaattaaaaataatttttgatgaTCAATATGATACTAATTATACTGAATCAGAAGCAATGCAAAACCCAAATGATTCCTTGAGATCGTATTTGATTGGAATGAGAAGTTTCCCCACAGTCATGGATACTCTTGGCAAGAGAATATCACAGGGATTAATAACCACCAATGATTCAAGCAATTTTTTCCTTCTGGGTGGCAGTCATCCTTCTTGCTTAGCCTATACAGGTGTAGGACCTTCAGCACCATTTCAAGTTCCTAAGGATATTGATTGTCGCATGGAGGGAATTGTCTTACGTGTTGTTTATTCATCAACATCTAAAAACATTGCAGCTGAATGTCTTACTTGTGTCTTGATTGTTAATTACACAAAGTGCACCATACCATATTTACAAGCGAGACACAATCATGTCTTTTAA 2217 0.373 MEKCIKELIYLQQLLYEVEVWVDGTDSWRWTPNSMGFFTDGGYYLKIAYKSSTSLERRTEAELVSEIVDNVKTLKTRFLNITQYPVGLDTRVQQVIRILENENQSNKVFLMGIWGMGGLGKTTVAKAIYNQFRHEFKNGSFIENISEACERGDDGIIHLQEQLLENVLKTNVKIHSMASGITTIEKIFKRNRALIVLDDISTFEQVKALCGTRDNFQSGSVLIVTSRDVGILKLLEVDYVFRIKEMDENQSLELFSWHAFRQPHPIEGFSELSKNIADYCRGLPLALEVIGSSLRKMPKQLWEVTLSKLKRIPTYKVQKTLKISYDSLDECQKDIFLDICCFFIGKDIAYVTEILNGCGLHADIGIADLIDQSLIKVEKNNKLGMHNLLRDMGREIVRQTSVQDPGKRSRLWFHEDVHEVLNENTGTKTVKGLVLKSQSTSNVCIKTDSFKEMKNLRLLRLDRVDLTGAFELLSKELRWLHWQRFTCEYIPDDFYLGNLVVFELKHSNIKRVWNETKLMEKLKILNLSHSKYLTSTPDFSKLPNLEKLIMKDCPSLSEVHWSIGDLRNLLLINLEDCTIRSLQQLRTVWIQCHSENQLSQELKIIFDDQYDTNYTESEAMQNPNDSLRSYLIGMRSFPTVMDTLGKRISQGLITTNDSSNFFLLGGSHPSCLAYTGVGPSAPFQVPKDIDCRMEGIVLRVVYSSTSKNIAAECLTCVLIVNYTKCTIPYLQARHNHVF 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00267 738 Gene3D - 245 329 IPR042197 -
Tsu08g00267 738 SUPERFAMILY "Winged helix" DNA-binding domain 316 421 IPR036390 -
Tsu08g00267 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 339 IPR027417 -
Tsu08g00267 738 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 63 577 - -
Tsu08g00267 738 Gene3D Ribonuclease Inhibitor 368 604 IPR032675 -
Tsu08g00267 738 SUPERFAMILY L domain-like 439 588 - -
Tsu08g00267 738 Gene3D - 72 239 IPR027417 -
Tsu08g00267 738 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 587 727 IPR044974 GO:0006952
Tsu08g00267 738 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 63 577 IPR044974 GO:0006952
Tsu08g00267 738 Pfam NB-ARC domain 90 330 IPR002182 GO:0043531
Tsu08g00267 738 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 587 727 - -
Tsu08g00267 738 PRINTS Disease resistance protein signature 280 294 - -
Tsu08g00267 738 PRINTS Disease resistance protein signature 187 201 - -
Tsu08g00267 738 PRINTS Disease resistance protein signature 110 125 - -
Tsu08g00267 738 PRINTS Disease resistance protein signature 517 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00267 Tsu-Chr8 2355505 2361423 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00267 97 585 WRKY Transcription Factor Family AT5G45050 33.142 8.60e-75 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00267 - - mtr:MTR_8g037220 772.696