Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00261 ATGTTGAATTCTTGCCCAACAAGAAaggaaacaacaaaaacaacaaaacccCACCAAGCACGGTTCAACTATTATAAAATCTCTAAACAACACACCACACAACAAATACAAACCACACTTCAAAGTTACAACATAAAAAACTCTACGCGGTTTTTTTCCAGAAACCCGGTCTGCTGCACCATGAACAGCAGTGAAAACAACCAAAACAACACAGTAAAATCATTAGATTTCAATAATCTCAAAGTTATCTCTGCCGTGGGACGCGGCGCCAAAGGCGTCGTGTTCCTCGCAAAAACCGGTAACCTATCATCCAATGAGTTTGTTGCTTTGAAAGTAATATCAAAAGCTCtaataaatcaaaagaaatcaaagaataaACCAGAAGGTTCTGGAGAGTATAAGAGAGCTTCATTTGAACAAGAAGTGCTACGTCGTTTTGATCATCCACTTTTACCACGGTTGCGTGGTGTTTTGGAAACCGAAAAAATCGTTGGATTCGCCATTGATTATTGCCATGGCGGTAACCTCCATTCTCTCAGAAAGAAACAATCTGAGAAAATGTTCTCCAATGACGCCATTAGgtTTTATGCAGCTGAATTGGTTCTAGCATTGGAGTATCTTCATGAATTAGGAATAGTGTATAGAGATTTGAAGCCAGATAACGTGATGATTCAAGAAAACGGTCACATAATGCTAGTAGATTTCGATCTATCTACAAAGCTGAAACCTAAATCAAAACCTCAATCGGTGAATCATGATTCATCGGAGAGGTCTAATTCTACGAAGGAGAAGCACGCGAAGAAGCAATTGTTTTCGCGATTCTACCGTTGTAACTCGGGGATCTCGCCGTGTGACTCGGATTTTGACTCGCAACAAAGTGTGAACTCAGTGAAAAAGAACGAGTTAGAATCGGTTGAGAAATCGAACTCGTTCGTTGGAACGGAAGATTACGTGGCACCTGAAATTGTAAACGGAAAAGGTCATGGTTACGAAGTTGATTGGTGGTCGTTAGGTATCGTTTTGTACGAAATGTTGTACGGAACGACGCCGTTTGATGGAATAAATAGGAAAGAAACATTTTACAGGATTTTGTCTAAGGAACCAGAGTTAACGGGAGAGAAAACGGCGTTAAgggatttgattaagaaattgTTGGAAAAGGATCCTGACTGTAGGATCAAGGTAGATGAAATCAAGGgtcatgatttttttaaaggagTAAAGTGGGACACGGTGTTGCAATTAGCAAGACCACCTTATATTCCTCCTTTGATTGAAGTTGAGAATGAGAAAACTGTGGGGTATAGTAAGAACTATGTGGAGGTGTTTGTTCATGAGTTGTTTTTTCCTAAGGGTGATGATGGAAATaatgaagagaaaaagaataataaaatggAAGAAAAGAAGGTTAATGGTGAGGAAAAGAGAGTGTGGGTTGATAAGTTGAGTAGTAGTCTCAATGagattgatgattttttaattttttga 1488 0.3636 MLNSCPTRKETTKTTKPHQARFNYYKISKQHTTQQIQTTLQSYNIKNSTRFFSRNPVCCTMNSSENNQNNTVKSLDFNNLKVISAVGRGAKGVVFLAKTGNLSSNEFVALKVISKALINQKKSKNKPEGSGEYKRASFEQEVLRRFDHPLLPRLRGVLETEKIVGFAIDYCHGGNLHSLRKKQSEKMFSNDAIRFYAAELVLALEYLHELGIVYRDLKPDNVMIQENGHIMLVDFDLSTKLKPKSKPQSVNHDSSERSNSTKEKHAKKQLFSRFYRCNSGISPCDSDFDSQQSVNSVKKNELESVEKSNSFVGTEDYVAPEIVNGKGHGYEVDWWSLGIVLYEMLYGTTPFDGINRKETFYRILSKEPELTGEKTALRDLIKKLLEKDPDCRIKVDEIKGHDFFKGVKWDTVLQLARPPYIPPLIEVENEKTVGYSKNYVEVFVHELFFPKGDDGNNEEKKNNKMEEKKVNGEEKRVWVDKLSSSLNEIDDFLIF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00261 495 SUPERFAMILY Protein kinase-like (PK-like) 77 436 IPR011009 -
Tsu08g00261 495 PANTHER FLIPPASE KINASE 1-RELATED 70 473 - -
Tsu08g00261 495 MobiDBLite consensus disorder prediction 246 266 - -
Tsu08g00261 495 ProSiteProfiles Protein kinase domain profile. 80 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00261 495 SMART serkin_6 80 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00261 495 Pfam Protein kinase domain 287 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00261 495 Pfam Protein kinase domain 82 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00261 495 MobiDBLite consensus disorder prediction 243 266 - -
Tsu08g00261 495 Gene3D Transferase(Phosphotransferase) domain 1 303 423 - -
Tsu08g00261 495 Gene3D Transferase(Phosphotransferase) domain 1 175 248 - -
Tsu08g00261 495 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 70 473 - -
Tsu08g00261 495 Gene3D Phosphorylase Kinase; domain 1 80 174 - -
Tsu08g00261 495 Coils Coil 456 476 - -
Tsu08g00261 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00261 Tsu-Chr8 2303239 2305200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00261 73 495 AGC Kinase Gene Family AT3G25250 55.059 1.93e-151 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu08g00261 Pkinase 8.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00261 K20714 - gmx:100785773 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00902 04 8621153 8623100 Tsu08g00261 08 2303239 2305200 PCT