Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00207 ATGAGTGGAGGAGAATTTGAAGAAGGACCCGATTTGAAATTTACTCCGACATGGATCGTCGGCCTCATTTGCACCGTCTTCATCTTCGTTTCCTACGGCATTGTACGTTCTCTTCATTATTTTGGCAAGTTTCTTTTGAGGAAAGAGCAGAAACCACTCTATCAAGCcttgcaaaaaataaaacaagAGTTTATGCTTGTGGGTTTTATGTCATTGTTTTTAACTGTGACACAAAATGGGATCACAAAAATTTGTATTCCAAAAAGTTGGTATCGTTATATGCTTCCTTGTAAACTTGAGGAAAAGAAAAGTGAAGAAGAACAATCAAAACCACCACCCACTTCACATTTTCAGACTTATTTCTCTTCCAACGATGTTCTCGACAATGCTAGGCTCCTTCTCGACATTGACACCGATGGTCGTCTTCCATTCTTAGAAGAAATACCTGGATATTGTGCTGCCAAgGGCAGGGTGCCTCTATTATCTGTGGAAGCATTGCATCACCTgcatgtctttatttttatCCAAGCTGTAACTCATGTGGCCTTGTGTATTTTAACTGTTGGTTTTGTAGGATTAATTATTCGTCGCTGGGAGGGCTGGGAAGATTCTATTACAAATGAAGACAATGAATCACGAGCAATGGCTAATGTTCATCATCATGAATTTATAAAAGATCGTGGAAAATATTCTTCTTTCATGGGATGGTTgaAATCATTTTTCAAGCAATTTTATGGATCTGTGACAAGGTTGGATTATGTTGCATTAAGGCATGGCTTCATTATGACTCATTGTAGGGGACATCCTAGGTTTAATTTTCACAAGTATGTGAACCGTGCACTTGAAGATGATTTCAAGAGAATTGTTGGCATTAAGTGGTATCTTTGGTTCTTTGTGGTCATATTTTTGTTGCTTAATATCAGTGGTTGGCACACATATTTCTGGATTTCTTTCATTCCTTTCCTTCTTCTATTTGCTGTTGGAACTAAGCTGGAACATGTAATAATTCAATTAGCAAATGAAGTATctgataaaaaatcaaacacacaatgTGGATTAATTGTTCAACCATCAGATGATCACTTCTGGTTTCATCGTCCTCGCATCGTCCTCTACTTGATTCACttgattcttttccaaaattCTTTTGAGATAGCATATTTTCTCTGGATACTGGTAACATATGGCGCTGATACATGTATAATGGGACAATTTACTTACATTATTCTAAGGGTCATTATTGGGGCATTAATTCAGATACTATGTAGTTTTAGTACCCTACCACTATATGCAATTGTTACTCAGATGGGAACTCACTTTAAGAATGTGATATTTAATGAGCAAATACAAGAAAGACTTATTAATTGGGCACATAAGGCAAAGAAGAAAGCAAATGATAATCATGGCCATTCATCTGTTGAAGTAAGTCCTCATCATCATGGTGCAAATCAATCTGGGGAAGGAAGTACTGATGATCATAGTAATGGTGAAAGTGCAAGTGCAAGTGAAACTGCAAGTATAGTTAGCATTGAGCTAGGGCCAGTTTCTAGAAGTCAACCTACcctagaagaagaagaagacgcAATTGTCCCTAAAGCTTATGAATCTTACTGTGCTCATTCGTCTCATGATTTTGACTCAATCGCTTTTCTCTTTAATGGTTATCGCATTTGGCCAGATCAGACTCCATATGAGGATGGGTACGGAGCTTCCTACAGCTTCCGAAGAAACTGTCCATTGAAAAAGCTTATGGATCAATATTGCAATCAATATAATCTGGATTTTAGTAGAGTTGGTTTTTTGTTTAATGGGCGCCTCGTCCAAGCTGAGCAGACTCCACACGAGCTGGGAATTGAAGATGGCGATGAAATGCTTGTCATGCTTCATCTGAGAAGACATGTTAAGTGTTTATGA 1914 0.3615 MSGGEFEEGPDLKFTPTWIVGLICTVFIFVSYGIVRSLHYFGKFLLRKEQKPLYQALQKIKQEFMLVGFMSLFLTVTQNGITKICIPKSWYRYMLPCKLEEKKSEEEQSKPPPTSHFQTYFSSNDVLDNARLLLDIDTDGRLPFLEEIPGYCAAKGRVPLLSVEALHHLHVFIFIQAVTHVALCILTVGFVGLIIRRWEGWEDSITNEDNESRAMANVHHHEFIKDRGKYSSFMGWLKSFFKQFYGSVTRLDYVALRHGFIMTHCRGHPRFNFHKYVNRALEDDFKRIVGIKWYLWFFVVIFLLLNISGWHTYFWISFIPFLLLFAVGTKLEHVIIQLANEVSDKKSNTQCGLIVQPSDDHFWFHRPRIVLYLIHLILFQNSFEIAYFLWILVTYGADTCIMGQFTYIILRVIIGALIQILCSFSTLPLYAIVTQMGTHFKNVIFNEQIQERLINWAHKAKKKANDNHGHSSVEVSPHHHGANQSGEGSTDDHSNGESASASETASIVSIELGPVSRSQPTLEEEEDAIVPKAYESYCAHSSHDFDSIAFLFNGYRIWPDQTPYEDGYGASYSFRRNCPLKKLMDQYCNQYNLDFSRVGFLFNGRLVQAEQTPHELGIEDGDEMLVMLHLRRHVKCL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00207 637 ProSiteProfiles Ubiquitin domain profile. 580 633 IPR000626 GO:0005515
Tsu08g00207 637 PANTHER MLO-LIKE PROTEIN 1 487 - -
Tsu08g00207 637 Pfam Ubiquitin-2 like Rad60 SUMO-like 575 627 IPR022617 -
Tsu08g00207 637 MobiDBLite consensus disorder prediction 477 500 - -
Tsu08g00207 637 SUPERFAMILY Ubiquitin-like 572 630 IPR029071 -
Tsu08g00207 637 Pfam Mlo family 11 479 IPR004326 GO:0006952|GO:0016021
Tsu08g00207 637 Gene3D - 564 634 - -
Tsu08g00207 637 PANTHER MLO-LIKE PROTEIN 1 1 487 IPR004326 GO:0006952|GO:0016021
Tsu08g00207 637 MobiDBLite consensus disorder prediction 464 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00207 Tsu-Chr8 1879215 1886653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00207 4 488 MLO family AT4G02600 54.125 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00207 K08472 - gmx:100811793 597.816