Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00192 ATGTCTTCCTCCTCAGATCATCCATGGATCTATGATGTGTTCATAAGTTTCAGAGGAAAAGATACTCGTCAGATCTTTGTTTCTCATCTCTATGCTGGACTCTCAAACGCGGGAATCCATACTTTTCTTGACGATGAGAAGCTTAGAAAAGGAAATAAGCTGGGAGCAGAACTAGAGAGAGCAATAGAAGGGTCTAAGATATCTATTGTTGTTCTCTCACCAAACTATGCAGAATCTAGCTGGTGTCTTAACGAACTGGTACACATCATGGAGTGCCAAAAAACTTATGGCCAGGTGGTTATACCAGTATTTTACTATGTTGACCCGACGTTTGTCCGTAAGCAGACGGGTGAATTTGGAAAAATCTTGCAAGTTACAgcaagaaaaaaagaagttcTCATGTCCAAGTGGAGGACGGCACTCAACGATGTTGCAAATCTATCCGGCTGGGATGCCAAAAATATCAGgaatgaaggtgaactaGTGAAGAAAATTGTTAAGGACATTTCGAAAAAGATAGATATCACATCGATGTCTATTACTAAATTTCCGGTTGGATTGGAATCCCGTGTGCAAAAAGTGACCAAGTTTATTGATGATCAATCAAGCAAAGCCTGTATGATAGGGATATGGGGAATGGGTGGATCCGGAAAAACAACTATGGCCAAAGCTATCTACAATCAAATCCATTTTAAATTCAAGGGCAGAACAAGTTTCGTTGAAAGTATTCGAGAAGTTTGTGATAATAATAGTAGAGGGATTATTCATTTACAAGAACAACTTCTTTCAGATCTCCTAAAAGTAAAACAGAAGATTCACAGCATTGCGTTGGGGATAACTAAGATTGAGTCAAGACTTCGGGGGCAAAAGGCTCTGGTCGTACTTGATGATGTGACCAAGTCTGAACAATTGAAAGCCCTGTGTGCAAATCCTAAGTTGTTTGGTTCACAAAGTGTTTTGATTATTACAACTAGAGATGTACGCCTTCTCAATTCACTTGGTGCTGACCATGTCTTCACAATGACGGAAATGGACAAAATACAGTCCCTTGAACTTTTCAGTTGGCATGCTTTTCGACAACCAAATCCTAGAGAAGATTTTACAAAACTCTCTACAGAAGTAGTTGCTTATTGTGGAGGATTACCATTGGCTCTTGAAGTCCTTGGATCTTATTTATCCGAGAGGACAAAACAAGAATGGAAAAGTGCACTATCAAAATTAGAGAAAATTCCCAACGATCAAGTGCAACAGAAACTGAGAATCAGCTACGATTGTTTAGAAGATCATACAGAAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAGCTGATGTTACAGAGATACTTAATGGTTGTGGACTTCATGCGGATATTGGAATAGCTGTCCTCATAGAGCGTAGCCTcgtaaaaattgaaaagaataaCAAGCTTCAAATGCATGATTTGCTACGAGACATGGGAAGAGCAATTGTCAGCGAACGTTCAGCAAAAGAGCCTGCAAAGCATAGCCGATTGTGGTTTTGTGAGGATGTGCTGCATGTTTTGTCAACAAATACTGGAACAGAAACTGTTGAGGGATTGATTTTGAAGTTGCAAAGAACAGGAAAAGTTAGCTTCAGTACTAATGCTTTCCAGGAGATGAAAAAACTGAGGCTTTTAAAACTTGATGGTGTTGACCTCGTCGGAGATTATGGGTTAATTTCCAAACAATTGAGATGGGTTGATTGGCAACGGTTCACCTTAAAATTTATACCCAATGACTTTGATCAAGGAAATCTAGTTGTTTTAGAATTAAAATATAGCAATGTTAAACAAGTTTGGCAGGAGACCAAGTTAATGGAGAAGCTAAAAATTCTCAATCTCAGTCATTCCAGGCACTTGAAAAGCACCCCTGACTTTTCAAAAATACCGAATCTAGAAAAGTTAATTATGGAGGATTGTCCAAGTTTGTCAGAGATACACTCGTCCATTGGAGATCTCAAGAATCTTCTTTTGATAAACTTGAAGGACTGTATAAGTCTTGGCAATCTCCCAAAAGAGGTCTATCAATTGAAATCAGTGAAAACTCTCATCCTTTTTGGTTGTTCAAAGATTGACAAATTGGATGACGATATAGTGCAAATGGAATCCTTGACAACTCTAATTGCAGCAAATACCGGTGTCAAACAAGTGCCATTTTCAATAGTAAGATTACAAAGCATTGGATATATATCTCTATGTGGATATGAAGGATTATCGCGTGATATTTTTCCTTCTCTCATTCAGTCATGGATGTCACCAGCCAAAACTTTCCTAGCCCATATTTCTCCATTTGGAAGCAATTCATTGTCTCTAGTTTCCTTGGATGTTGAGAGTAATAATATGAGCTCTCAAATTCAAACGCCAACGGTTACCGTCCTTTCAAAACATAGAAGTGTTTGGGTTCAATGCCACTCAGAGATTCAACTAACACAAgagtttaaaaaatttgttgatgATCTATATGATGTGAATTTTACTGTGCCGGAAACAACATATGGACCACAAATCTCAAATCTTTCTTTGAGATCACTTTTGTTTGGAATGGGAAGTTCCCAAATAGTCATCAACACTATTGGGAACAGTTTATCACAGGGATTGACAACCAATTCTAGTGATTCTTTCCTTCCGGGTGACAATTGTCCTTCATGGCTGGCCTATAAATGCGAAGGACCTTCGGTACTTTTCCAAGTGCCTGAGGATAGTGATTGTTGTATGAAGGGAATAGCTTTATGTGTTCTTTATTCATCAACACTTGAAAATCTGGCAATTGAATGCTTCATTAGTGTCTTCATCATTAATTACGCAAAATTCACTATCCAGATATACAAGCAAGATACAATAATGTCATTTAATGATGAAGATTGGCAAGGCATAGTATCAAATTTAGGAGTTGGTGACAATGTGGAGATTTTTGTAGCTATTGGGCATGGATTGACTGTTAAGGAGACGGCTGTCTATCTAATATATGATCAGTCAAATGATATGGGAATTGAGCCATCAATTACCATGGATGTTGAGCCATCTACAAATGCAAAAATTGAGTCATTACATGAAGTGAAAGTGAAGCCATCACCTAAAATAGAACCATCACTTCTTGTCAAGAATGATCCATTGccgaaaaaaaatagaaaaatcttTATAAGACTTACAAAGACAGTGAGGGAATGTTTATGCTTGAACCAGAATAGAGATTGCAACACTTTTTGA 3243 0.3694 MSSSSDHPWIYDVFISFRGKDTRQIFVSHLYAGLSNAGIHTFLDDEKLRKGNKLGAELERAIEGSKISIVVLSPNYAESSWCLNELVHIMECQKTYGQVVIPVFYYVDPTFVRKQTGEFGKILQVTARKKEVLMSKWRTALNDVANLSGWDAKNIRNEGELVKKIVKDISKKIDITSMSITKFPVGLESRVQKVTKFIDDQSSKACMIGIWGMGGSGKTTMAKAIYNQIHFKFKGRTSFVESIREVCDNNSRGIIHLQEQLLSDLLKVKQKIHSIALGITKIESRLRGQKALVVLDDVTKSEQLKALCANPKLFGSQSVLIITTRDVRLLNSLGADHVFTMTEMDKIQSLELFSWHAFRQPNPREDFTKLSTEVVAYCGGLPLALEVLGSYLSERTKQEWKSALSKLEKIPNDQVQQKLRISYDCLEDHTEKDIFLDICCFFIGKNRADVTEILNGCGLHADIGIAVLIERSLVKIEKNNKLQMHDLLRDMGRAIVSERSAKEPAKHSRLWFCEDVLHVLSTNTGTETVEGLILKLQRTGKVSFSTNAFQEMKKLRLLKLDGVDLVGDYGLISKQLRWVDWQRFTLKFIPNDFDQGNLVVLELKYSNVKQVWQETKLMEKLKILNLSHSRHLKSTPDFSKIPNLEKLIMEDCPSLSEIHSSIGDLKNLLLINLKDCISLGNLPKEVYQLKSVKTLILFGCSKIDKLDDDIVQMESLTTLIAANTGVKQVPFSIVRLQSIGYISLCGYEGLSRDIFPSLIQSWMSPAKTFLAHISPFGSNSLSLVSLDVESNNMSSQIQTPTVTVLSKHRSVWVQCHSEIQLTQEFKKFVDDLYDVNFTVPETTYGPQISNLSLRSLLFGMGSSQIVINTIGNSLSQGLTTNSSDSFLPGDNCPSWLAYKCEGPSVLFQVPEDSDCCMKGIALCVLYSSTLENLAIECFISVFIINYAKFTIQIYKQDTIMSFNDEDWQGIVSNLGVGDNVEIFVAIGHGLTVKETAVYLIYDQSNDMGIEPSITMDVEPSTNAKIESLHEVKVKPSPKIEPSLLVKNDPLPKKNRKIFIRLTKTVRECLCLNQNRDCNTF 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00192 1080 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 150 IPR035897 -
Tsu08g00192 1080 Gene3D Ribonuclease Inhibitor 520 837 IPR032675 -
Tsu08g00192 1080 Gene3D - 5 179 IPR035897 -
Tsu08g00192 1080 Gene3D - 180 341 IPR027417 -
Tsu08g00192 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 438 IPR027417 -
Tsu08g00192 1080 ProSiteProfiles TIR domain profile. 9 173 IPR000157 GO:0007165
Tsu08g00192 1080 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 1001 - -
Tsu08g00192 1080 SUPERFAMILY L domain-like 483 798 - -
Tsu08g00192 1080 PRINTS Disease resistance protein signature 285 299 - -
Tsu08g00192 1080 PRINTS Disease resistance protein signature 207 222 - -
Tsu08g00192 1080 PRINTS Disease resistance protein signature 378 392 - -
Tsu08g00192 1080 PRINTS Disease resistance protein signature 616 632 - -
Tsu08g00192 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 1001 IPR044974 GO:0006952
Tsu08g00192 1080 Gene3D - 344 427 IPR042197 -
Tsu08g00192 1080 SMART till_3 10 147 IPR000157 GO:0007165
Tsu08g00192 1080 Pfam NB-ARC domain 188 418 IPR002182 GO:0043531
Tsu08g00192 1080 Pfam TIR domain 11 180 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00192 Tsu-Chr8 1758048 1763384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00192 1 736 WRKY Transcription Factor Family AT4G12020 30.475 3.08e-78 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00192 - - mtr:MTR_2g437560 1290.02