Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00191 AtgtcctcctcctcctcctcctccaacCATCCATGGATATATGACGTGTTCATCAATTTCAGAGGGAAAGATACTCGTACGAAGTTCGTTTCTCATCTCTATGCAGCACTCTCAAACGCAGGAATCAACACTTTTATTGATGATGAGAATCTTGAAAAGGGAGAGGAGCTGGAAGCAACACTAAAGAGGGCAATAGAAGGGTCTCAAATAGCTATTGTTGTTATTTCAAAGTACTATGCAGAATCTAGTTGGTGTCTTAACGAACTGGTACATATCATGGAATGTCACAAAACTTATGGCCAGATTGTTATACCTGTTTTTTACTATGTTGATCCATCGATTGTCCGTGATCAGAGAGCTAGTTTTGGAGATGCCATGATATTTACTGCAAGAAAAAGAGAACTTCTCTTGTCCAAATGGAGAGGGGCCCTCACCGATGTTGCTGGTCTAGCCGGCTGGGATGCCAACAATTTTAgAGGAACTGAAAGTAAACTACTGCAGCTTATTATAAAGgacattttgaaaaaactagATATCTCATTGTTAGATATTACTGAATTTCCGATTGGATTGGAATCCCGGGTGCAACAGATTACCAATTTTATTGATGATCAGTCAAGCAAAGTCTGTATGATAGGGATATGGGGAATGGGTGGATCCGGGAAAACAACCTTGGCCAAAGCTATCTACAATAAAATCCAAAGTAGATTCAAGGGTAGAACAAGTTTCATTGAAAGTATTCGAGAAGTCTGTAGTAATAATCATAAAGGGATTATTCatttacaaaaacaacttatttcAGATCTCTTTAAAATAAAGCAGAACATTCATAGCATTGCATCGGGGAAAACTAAGATCAAGACAAGACTTCGGAGGCAAAAGGCTTTTGTGGTACTGGATGATGTGACCAAATCGGATCAATTGAGAGATCTGTGTGCAAATCCTAAGTTGTTTGGTTCGAGAAGTGTATTAATTATTACAACTAGAGATGTTCGCCTTCTCAGTTCACTTAAAGATGACCATATCTTCACAATGATGGAAATGGACAAAAACCAGTCTCTTGAACTTTTCAGTTGGCATGTTTTTCGACAACCAATTCCTGAAGAAGATTTTTGTGAACTCTCTAAAAATGTAGTTGCTTATTGTGGAGGATTACCATTGGCTCTTGAAGTCCTTGGATCTTACTTATATAAGAGGAATAAACAAGAATGGAGAAGTGCACTATCAAAATTAGAGAAAATTCCCAACGATCAAGTGCAACAAAAACTGAGAATCAGCTACGATGGTTTAGAAGATTATACGCTAAAGGATATATTTCTTGATATATGTTGTTTCTTCATTGGAAAGAAAAGAGCAGATGTTACGGAGATACTAAATGGCTGTGGACTTCATGCTGATATCGGAATAGGTGTCCTCATAGAGCGCAGCCTTGTAAAAGTTGAAAAGAATAACAAGCTTCGAATGCATGATTTGATACGAGACATGGGAAGAGCAATTGTTAGCAAAAGTTCAGTAAAAGAGCCTGCAAAGCATAGTCGATTGTGGTTTCATGAGGACGTGCTGGATGTTTTGTCAACAAATACTGTAACAGAAACCGTAGAAGGTTTAGTTTTAAAGTCACAAAGAACTGGCAGATTTTGCTTCAATACTGATTCTTTCAAGGAGATGAAGAAACTCAGACTTCTACAACTTGATGGTGTTGACCTCACTGGGGATTATGGGTATCTTTCCAAACAACTGAGATGGGTTGATTGGCAACGGTTTACCTTCAACTTTATACCCAATGACTTTGATCAGGGAAATCTAGTTGTTTTTGAATTGAAGTACAGTAATGTTAAACAAGTCTGGCAGGAGACCAAgTTGTTGCAGAAGCTAAAAATTCTCAATGTCAGTCATTCCAAGTACTTGAAAAACACTCCTGACTTTGCAAAATTACCAAACCTAGAAAAGCTCATTATGAAGGATTGTCAAAGTTTGTCCGAAGTACACCCGTCCATTGGAGATCTCAAGAATCTTCTTCTTATAAATTTTAAGGATTGTACAAGTCTTAGCAATCTCCCAAAAGAGATATATCAATTGACATCAGTAAAAACTCTCATCCTTTCTGGTTGTTCAAGGATTGACAAATTGGAAGAAGATATAGTGCAAATGGAATCCTTGACAACTCTAATTGCACCAAATACTAGTGTCAAACAAGTGCCATTTTCTATAGTTAGATTAAAAAGCATTGGATATATATCCTTATGTGGATATGAAGGCTTATCACATGATGTTTTTCCTTCTATCATTAGGTCTTGGATTTCACCAACAATGAATTCCTTAGCACATATTCCCCCTTTTGGTGGCATGTCAATGTCTCTTGTTTCCTTGAATGTAGATAGTAGAAATTCGGGTTTGGTCTATCAATCACCATTACTTGGCAGCGGTTCAACACTTAGAAGTGTTTTGATACAATGTGACTCAGAGATTCAACTGAAACAAGAATTCAGAAGATTTCTTGATGATCTACATGGTGCAGGTCTTACTGAAGTGGGAACATCAAATGCCTCACAAATTTCGGATCTTTCGTTGAGATCCCTTTTGTTTGGTATTGGAAGTTGCCACAGTGCCTTTGATACTCTTGGGAAGAGCTTATCACAGGGATTGTCAGACTATGATTCTAGAGATTCTTTTCTTCCGGGCGACAACTATCCCTCATGGTTAACCTATAAATGTGAAGGACCTTTGCTACCTCTTCAAGTGCCCAAGAACTGTGATTTTTCCATGAAGGGAATAACTTTATGTGTtatttattcatcaacacatGAAAACCTAGCAACTGAATGTCTCCCTAGTCTCTTGAtcattaattacaaaaaattcaCTATCCAGATTTACAAACGAGACACGGTAAGGTCGTTCAATGATGAAGATTGGCAAGGGGTGATATCAAATTTAGGAATTGGTGACAATGTGGAGATTTTTGTAGCTATTGGGCATGGATTTACTGTTAAGGAGACGGCTGTCTATCTAGTATATGACCAGTCAAATGCTATAGAAATCGAGCCATCAAATACTATAGAAGTTGACCCGTCGACTGACACAAAAATTGAGCCATTACATGAAGTGGAAGTGCAACCATCACCTAATCTTAAAATGGAACCATCACTTGTTGTCAAGAATGAACCATTCATGAAGACAAATAGAAAAATCTTTACAAGACTTGCAAAGAGAGTGGGAAATTGTTTATGCTTGAACCAGAATTGA 3246 0.366 MSSSSSSSNHPWIYDVFINFRGKDTRTKFVSHLYAALSNAGINTFIDDENLEKGEELEATLKRAIEGSQIAIVVISKYYAESSWCLNELVHIMECHKTYGQIVIPVFYYVDPSIVRDQRASFGDAMIFTARKRELLLSKWRGALTDVAGLAGWDANNFRGTESKLLQLIIKDILKKLDISLLDITEFPIGLESRVQQITNFIDDQSSKVCMIGIWGMGGSGKTTLAKAIYNKIQSRFKGRTSFIESIREVCSNNHKGIIHLQKQLISDLFKIKQNIHSIASGKTKIKTRLRRQKAFVVLDDVTKSDQLRDLCANPKLFGSRSVLIITTRDVRLLSSLKDDHIFTMMEMDKNQSLELFSWHVFRQPIPEEDFCELSKNVVAYCGGLPLALEVLGSYLYKRNKQEWRSALSKLEKIPNDQVQQKLRISYDGLEDYTLKDIFLDICCFFIGKKRADVTEILNGCGLHADIGIGVLIERSLVKVEKNNKLRMHDLIRDMGRAIVSKSSVKEPAKHSRLWFHEDVLDVLSTNTVTETVEGLVLKSQRTGRFCFNTDSFKEMKKLRLLQLDGVDLTGDYGYLSKQLRWVDWQRFTFNFIPNDFDQGNLVVFELKYSNVKQVWQETKLLQKLKILNVSHSKYLKNTPDFAKLPNLEKLIMKDCQSLSEVHPSIGDLKNLLLINFKDCTSLSNLPKEIYQLTSVKTLILSGCSRIDKLEEDIVQMESLTTLIAPNTSVKQVPFSIVRLKSIGYISLCGYEGLSHDVFPSIIRSWISPTMNSLAHIPPFGGMSMSLVSLNVDSRNSGLVYQSPLLGSGSTLRSVLIQCDSEIQLKQEFRRFLDDLHGAGLTEVGTSNASQISDLSLRSLLFGIGSCHSAFDTLGKSLSQGLSDYDSRDSFLPGDNYPSWLTYKCEGPLLPLQVPKNCDFSMKGITLCVIYSSTHENLATECLPSLLIINYKKFTIQIYKRDTVRSFNDEDWQGVISNLGIGDNVEIFVAIGHGFTVKETAVYLVYDQSNAIEIEPSNTIEVDPSTDTKIEPLHEVEVQPSPNLKMEPSLVVKNEPFMKTNRKIFTRLAKRVGNCLCLNQN 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00191 1081 Gene3D - 7 182 IPR035897 -
Tsu08g00191 1081 Gene3D - 347 431 IPR042197 -
Tsu08g00191 1081 PRINTS Disease resistance protein signature 382 396 - -
Tsu08g00191 1081 PRINTS Disease resistance protein signature 289 303 - -
Tsu08g00191 1081 PRINTS Disease resistance protein signature 691 707 - -
Tsu08g00191 1081 PRINTS Disease resistance protein signature 211 226 - -
Tsu08g00191 1081 SMART till_3 13 150 IPR000157 GO:0007165
Tsu08g00191 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 442 IPR027417 -
Tsu08g00191 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 153 IPR035897 -
Tsu08g00191 1081 ProSiteProfiles TIR domain profile. 12 177 IPR000157 GO:0007165
Tsu08g00191 1081 Gene3D Ribonuclease Inhibitor 524 860 IPR032675 -
Tsu08g00191 1081 Pfam TIR domain 14 178 IPR000157 GO:0007165
Tsu08g00191 1081 SUPERFAMILY L domain-like 487 815 - -
Tsu08g00191 1081 Gene3D - 183 343 IPR027417 -
Tsu08g00191 1081 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 1006 - -
Tsu08g00191 1081 Pfam NB-ARC domain 192 421 IPR002182 GO:0043531
Tsu08g00191 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1006 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00191 Tsu-Chr8 1751979 1756975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00191 14 740 WRKY Transcription Factor Family AT4G12020 28.591 1.44e-73 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00191 - - mtr:MTR_8g011710 1338.17