Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00155 ATGAGTAGAAGATGTCCTCCTGATTGTGAATTTGGCCAATATTTTCCAGCCAATAGGAATGATGATTTTCAGAAAGCCACTAAGCTTTTTGGATTAAGTCATATATTGGAAATTATGAGATCAGTTGAGCCAAATGAAAGACAAGCTGCTGCTgattcaattctctttgaaggCAATATTTGGAGACTTTATCCACAAAGTGGGCTGCTTAAATATGAGTTGGATTTGGTTAACACAATATTTTCATCTTTGAGAGAATTACAAATTGCTAATCAAGTTTTGGCATTTTGTAAGGATCAAACAAATGAAAGGTCTGGTAGAGACATGGGTGATATTTCAACTGTTCGTGAAAAAGGAGAATCAAGTAATGCATCCAAGGGAAAGGAAGCTGTTGAAGATGGTGAAAAGGGAAAAGGAATTATTATTGAACAAGATGAATCAGAAGACAGTGATGAGGAGGAAGGCCCAAAGAAAAAACGCaaaatttga 489 0.3415 MSRRCPPDCEFGQYFPANRNDDFQKATKLFGLSHILEIMRSVEPNERQAAADSILFEGNIWRLYPQSGLLKYELDLVNTIFSSLRELQIANQVLAFCKDQTNERSGRDMGDISTVREKGESSNASKGKEAVEDGEKGKGIIIEQDESEDSDEEEGPKKKRKI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00155 162 MobiDBLite consensus disorder prediction 101 144 - -
Tsu08g00155 162 MobiDBLite consensus disorder prediction 100 162 - -
Tsu08g00155 162 Pfam Lateral organ boundaries (LOB) domain 2 90 IPR004883 -
Tsu08g00155 162 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 150 - -
Tsu08g00155 162 ProSiteProfiles LOB domain profile. 1 94 IPR004883 -
Tsu08g00155 162 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25-LIKE 2 150 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00155 2 76 AS2 family AT2G19820 39.024 1.16e-14 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu08g00155 LOB 4.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00155 - - mtr:MTR_8g009730 128.642