Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00136 ATGGCTTCTACATTTCTCACCATACCAACTCCTTTCCTTCACAAAACCACCACTGCTTCTTTCTCTAACCGGAAACTCCCACTTTTGAAGAGGAACTCTTTGAAGGTTAATGCAATTTCCAAAACATGGGAACCTACTAAGGTTGTGCCTCAGGCTGATAGGGTTCTTATTCGTTTGGAGGAGTTATCAGAACAAACAGCTGGTGGAATTTTGTTGCCCAAGTCAGCTGTTAAATTTGAGCGATATCTTGTTGGAGAAGTCCTAAATGTTGGTGCTGAGGCTGAAAATGTGAAGGCTGGAGCAAAGGTTTTATTCAATGACGTAAATGCTTACGAGGTGGATTTGGGGACTAATGCAAAGCACGTCTTCTGTAAATCAAGCGACTTATTGGCCGTGGTTGAGTAG 405 0.4272 MASTFLTIPTPFLHKTTTASFSNRKLPLLKRNSLKVNAISKTWEPTKVVPQADRVLIRLEELSEQTAGGILLPKSAVKFERYLVGEVLNVGAEAENVKAGAKVLFNDVNAYEVDLGTNAKHVFCKSSDLLAVVE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00136 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 16 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu08g00136 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu08g00136 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Tsu08g00136 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu08g00136 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Tsu08g00136 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Tsu08g00136 134 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 16 133 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00136 1 134 Calmodulin-binding Proteins AT5G20720 27.273 1.11e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00136 K04078 - gmx:100306026 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00136 08 1235332 1238890 Tsu08g00136 08 1235332 1238890 ECH