Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00122 ATGTTCCGCCGCGCTACATCTACTTTCCTCTCTCGCACCGCAGCTACACGTCGATTCTCCACCGATGTGGCTACACCTGCCGCCGATTCCGCTTTCATTGAAGCTTGGAAGAAAGTTAGCCCCAATCTCGACCCACCAAAGACACCTCTCGAATTCCTCAAAACTCGTCCTCCAGTTCCATCTACGCTTCCTACTAAACTCACTGTCAATTTCGTTCTTCCTTATTCTTCTCAATTGGCCGCTAAAGAGGTTGATATGGTTATAGTCCCAGCTACAACTGGCCAGATGGGTGTTCTCCCAGGACATGTCCCAACAATTGCTGAGTTGAAACCTGGGGTCCTGTCTGTACATGAAGGGAATGATACAACTAAGTATTTTGTAAGCAGTGGCTTTGTCTTCATCCATGCAAACTCTGTTGCTGATATTATCGCTGTTGAGGCTGTCCCAGTAGATCAAATTGATGCAAGCCAAGTGCAGAAGGGTCTTCAAGAGTTCACTCAGAAGCTCAACTCAGCATCAACTGACTTGGAGAAAGCTGAAGCCCAGATTGGAGTTGATGTGCATAGCGCTCTCAACTCAGCTCTTACCGGCTAA 594 0.4764 MFRRATSTFLSRTAATRRFSTDVATPAADSAFIEAWKKVSPNLDPPKTPLEFLKTRPPVPSTLPTKLTVNFVLPYSSQLAAKEVDMVIVPATTGQMGVLPGHVPTIAELKPGVLSVHEGNDTTKYFVSSGFVFIHANSVADIIAVEAVPVDQIDASQVQKGLQEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00122 197 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 197 IPR001469 GO:0015986|GO:0045261|GO:0046933
Tsu08g00122 197 CDD F1-ATPase_delta 67 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Tsu08g00122 197 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 148 IPR036771 -
Tsu08g00122 197 Hamap ATP synthase epsilon chain [atpC]. 65 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Tsu08g00122 197 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 78 182 IPR001469 GO:0015986|GO:0045261|GO:0046933
Tsu08g00122 197 Coils Coil 162 182 - -
Tsu08g00122 197 Gene3D - 154 196 - -
Tsu08g00122 197 Gene3D - 57 153 IPR036771 -
Tsu08g00122 197 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 67 139 IPR020546 GO:0015986
Tsu08g00122 197 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 197 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00122 1 197 Primary Pumps ATPases AT5G47030 70.244 1.83e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00122 K02134 - gmx:100780778 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00122 08 1127500 1130209 Tsu08g00122 08 1127500 1130209 ECH