Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00119 ATGAAGTGCTTTTCCATTTTCAAAGACAAATACAAGGGTAGGGGTCAAAGATCAGCACCTGAACTAAAAGAGCAAGAGAAACATCAGTTTTCAGGATCTGATAGAGTTGCAAAGTCTTCTTGTTCATCTACCTCTTCACCTAGGGGTATACCAAAACTTTATGAGGAAAAAGGTCATAATTTGAGGGTCTTTTCTTTCTCCGAGCTTAAACGTGCAACAAATGATTTCAATAGGCTTCTTAAGATAGGTGAAGGTGGATTTGGGAGTGTTTTTAAAGGTTCAATTAAACCTGTTGATGGAAATGGTGATCCTATCTTAGTTGCCATCAAAAGGCTTAACAAGGATGCATTGCAGGGTCATAAGGAATGGTTGACAGAAGTTCAGTTTCTTGGTGTTGTTGATCATCCAAACCTTGTGAAGCTTATTGGATACTGTGCTGTGGATGGTGAGAGAGGGATCCAAAGATTACTCGTGTACGAATACATGCCGAATAGAAGCTTAGAAGCTCATCTTTTCAATAAAGCTTATGATCCCGTGCCTtggaaaacaagacttgaaATTGCACTTGGAGCAGCTCAAGGCTTATCTTATCTCCATGAAGAGTTAGAAGTCCAGGTGATATATCGCGATTTTAAATGCTCAAACGTGCTACTGGATGAAAATTTTAAGCCAAAACTTTCTGATTTCGGACTTGCTAGGGAGGGACCGGTAGCTGGAGATACTCATGTTTCAACTGCTGTAATGGGGACACATGGTTACGCCGCTCCAGATTACATTGAGACAGGCCATCTCACAGCCAAAAGTGATGTATGGAGTTTCGGCGTTGTTCTATACGAAATACTTACCGGTAGGCGTTCATTAGCAAGACACAGGCCGAAAACGGAACAAAAACTATTGGAATGGGTGAAGAACTATCCTCACGATAGTAAAAAGTTCGACACAATAATGGATCCAAGACTTGAAGGAAAGTATTCCATTAACGCAGCGCGAAAAATCGCTAAACTCGCAGATCATTGTCTACGCAAGAGTTCGAAAGATAGACCGCCGATGAGTCAAGTGGTAGAGAGATTGAAGGAAATAATTCAATCTTctgatgaagaacaagaagaacatGAGCCTAACGAAATAAACGCTGTCGAGGTATCTGAAAATGATTCAGTTGAGCATCAAGAAGAAACAAATCAGTCAGGCTCAACTGAGTTATGGAGAAAGAGAATGGAACATCTTGCAAAACTTGGTGAACATGTGGAGGATTCTAGTAGAAGAAGGTTTATGATCCAACATCAACTTAGAGCCAATGTGTCTACATAG 1311 0.3951 MKCFSIFKDKYKGRGQRSAPELKEQEKHQFSGSDRVAKSSCSSTSSPRGIPKLYEEKGHNLRVFSFSELKRATNDFNRLLKIGEGGFGSVFKGSIKPVDGNGDPILVAIKRLNKDALQGHKEWLTEVQFLGVVDHPNLVKLIGYCAVDGERGIQRLLVYEYMPNRSLEAHLFNKAYDPVPWKTRLEIALGAAQGLSYLHEELEVQVIYRDFKCSNVLLDENFKPKLSDFGLAREGPVAGDTHVSTAVMGTHGYAAPDYIETGHLTAKSDVWSFGVVLYEILTGRRSLARHRPKTEQKLLEWVKNYPHDSKKFDTIMDPRLEGKYSINAARKIAKLADHCLRKSSKDRPPMSQVVERLKEIIQSSDEEQEEHEPNEINAVEVSENDSVEHQEETNQSGSTELWRKRMEHLAKLGEHVEDSSRRRFMIQHQLRANVST 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00119 436 MobiDBLite consensus disorder prediction 34 49 - -
Tsu08g00119 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Tsu08g00119 436 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00119 436 PANTHER OS01G0588500 PROTEIN-RELATED 27 418 - -
Tsu08g00119 436 MobiDBLite consensus disorder prediction 12 50 - -
Tsu08g00119 436 Gene3D Phosphorylase Kinase; domain 1 51 161 - -
Tsu08g00119 436 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672|GO:0006468
Tsu08g00119 436 ProSitePatterns Protein kinases ATP-binding region signature. 82 110 IPR017441 GO:0005524
Tsu08g00119 436 MobiDBLite consensus disorder prediction 12 33 - -
Tsu08g00119 436 MobiDBLite consensus disorder prediction 374 390 - -
Tsu08g00119 436 CDD STKc_IRAK 82 360 - -
Tsu08g00119 436 MobiDBLite consensus disorder prediction 362 402 - -
Tsu08g00119 436 SUPERFAMILY Protein kinase-like (PK-like) 59 378 IPR011009 -
Tsu08g00119 436 PANTHER OS07G0495150 PROTEIN 27 418 - -
Tsu08g00119 436 Gene3D Transferase(Phosphotransferase) domain 1 162 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00119 Tsu-Chr8 1103473 1107981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00119 62 357 Glycoside Hydrolase AT3G07070 49.664 2.14e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu08g00119 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00119 - - cam:101511022 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00119 08 1103473 1107981 Tsu08g00119 08 1103473 1107981 ECH