Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00112 ATGAGCATAGTAGAAATTGTTGAGATAAGCACAATGAAGGTTATTTTGGGGGCATTTTTGGTAGTTTTGGCTCatattttgcatattttagtGTCGAGGCCTAGATCACTTAGAGCAAAGCTTCAAAGGCAGGGCATTGATGGGCCTTCACCTCACTTTTACTTTGGTTCCATATACTTGTTTTCTTCTGGGAGTATACAATGGTTAATGGTATCAGATAAAGATATGGTAAAAGAAATTGCTTTGAGCACTTCTTTAATTCTAGGGAAGCCTTCTTTTATATCCAAAGATATTAGGCCACTCGTTGGACAAGGTATATTGTCATCAAGTGGACAATATTGGGCTCATCAAAGGAAGATAATTTCTCCTGAATTGTACCAAGATAAAATGAAGGCAAAGGTGAATATGATAGTTGACTCAACAAATGTAATGTTAAAATCATGGATGACCAAATTTGAAAAAGATGGGGAAGTTTTAGAGATAAATGTTGATGAAGATTTGCGAAACTTATCGGCTGACATAATTGCAAGAGCTTGTTTTGGGAGTAATTATGTTGAAGGAAGAGAAATATTCACAAAGCTTAGAGAACTTCAAAGCCTCCTTTGCAAGATATCTCCTGGAATTCCAGGTTATAGATACTTGCCAAACAAAAGCAATAGACAAATGTGGAGATTAGAGAAAGAGATAAACTCAAGGATATCAAAGCTAATAAAACAACGCCAAAATTATGCTAATGATGAGCAAGATCTCTTGCAAATGATACTTGATAGTGCAAAGAAATGTGAGAATGGTGATAGTTTCTTACCAAATTCCAACTCACGAGACAGATTCATGATAGATAATtgcaaaaatatattctttgCTGGTCATGAACCTACTGCAATTACATTATCATGGTGCTTAATGTTGTTAGCTATGCATCAAGATTGGCAAGATCGTGTTCGTAATGAGTTGGTTGAAATTTGTGGAAATGATGGTAATCTTGATGCTAGTGTACTTAAAAGCATGAAAACGTTAACCATGGTGATTCAAGAGACACTGAGGCTTTATCCACCATCATCATCGGTTAATAGATGTGCTTTAAAAGACATTAACTTCAAAGGTATCTTAGTTCCAAAAGGAATGAATATTCAAATTCCAATGACAATATTGCATCAAGACCCAATGCTTTGGGGGGATGATGCACATAAATTCAATCCACAAAGATTTGCAAATGGATTGCATGGAGCATGCAAGATTCCACAAGTTTACATGCCATTTGGAATGGGACCTCGTGTGTGTTTAGGACAACATTTAGCCATGATTGAATTGAAGGTTATTTTGTCTCTCATTTTGTTCAAGTTTCAATTCTCATTATCATCAAGTTATTGTCATTCACCTTCCTTCCACATGCTTATAGAACCTCGTCATGGAGTTCTTCTTCACATGACTAGAATCTAA 1440 0.3514 MSIVEIVEISTMKVILGAFLVVLAHILHILVSRPRSLRAKLQRQGIDGPSPHFYFGSIYLFSSGSIQWLMVSDKDMVKEIALSTSLILGKPSFISKDIRPLVGQGILSSSGQYWAHQRKIISPELYQDKMKAKVNMIVDSTNVMLKSWMTKFEKDGEVLEINVDEDLRNLSADIIARACFGSNYVEGREIFTKLRELQSLLCKISPGIPGYRYLPNKSNRQMWRLEKEINSRISKLIKQRQNYANDEQDLLQMILDSAKKCENGDSFLPNSNSRDRFMIDNCKNIFFAGHEPTAITLSWCLMLLAMHQDWQDRVRNELVEICGNDGNLDASVLKSMKTLTMVIQETLRLYPPSSSVNRCALKDINFKGILVPKGMNIQIPMTILHQDPMLWGDDAHKFNPQRFANGLHGACKIPQVYMPFGMGPRVCLGQHLAMIELKVILSLILFKFQFSLSSSYCHSPSFHMLIEPRHGVLLHMTRI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00112 479 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 58 - -
Tsu08g00112 479 PANTHER CYTOCHROME P450 FAMILY MEMBER 59 474 - -
Tsu08g00112 479 Gene3D Cytochrome P450 33 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 Pfam Cytochrome P450 55 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Tsu08g00112 479 SUPERFAMILY Cytochrome P450 54 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PRINTS E-class P450 group I signature 170 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00112 479 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 58 - -
Tsu08g00112 479 PANTHER CYTOCHROME P450 FAMILY PROTEIN 59 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00112 Tsu-Chr8 1030199 1034066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00112 76 476 Cytochrome P450 AT5G24900 43.902 5.61e-124 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00112 K24544 - gmx:100780335 659.833