Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00084 ATGTCGCCGCCGGAATCACAACTCGATCCGAATCCCTTCTTCCATGAACATTCATGGCACCTCTTATCACTACTATTCCAGATCGGTCATCCCGTCGACGCCGATTATCTATCTTCCCGTTGCCGATTATTCAACGCTTCTCCCGATTTCATCCGTTTCGTTGCATCGCTTTCTGATTATCCTCTCTCCATTAACAGTAACGGACTCATAATTCCTTCCGTTACAGCATTTGTCTCCATAGCTaggtttttcaatttttacttcGATAATTCAACTCCATCGAATTCTCGAAAACGCAAGTCAATTTTGTCAATTACTGAAGGTGAAAGAGATGCTAAACGAATTGCAATTGGTGATAAAGTACCGGAAATTTTCGTCAAGaGTTTTTCTGATACTACTGTAGAGGATGTGATGAGAAGAAGTTTCTTTGCAATGCAATCTGAATCTCGGATTATGCATGGAGGGAATCCTATGATTCCTATACGTATTGATACAATTGGAGGGTATTCAGGTTGTTCGGAACAGAATTTTGAATACAGGGAAGCTGATAATGATGGCATAACAAACACGGCCCAGGGAGATATTTCTGGCGCTCTGATCAAAACCAGCGAGAGTTTTTTCATTAATGAAAGTGGCTTGATGAAGCTTGACCAGGATTTAGATAGACTTGCATGGAATAATTCCTTTGTGAGTCTTGCTCCACCAACTAATGTCCAGGATCAATCTCCGTGTAATGAGGGTGGTGTTGTTAGTATTGGATCAGAGAAGAAAATGGATTGCCTTGACACATTTGGGAATGAATATCCTGAACAAAACATAACCCCTActgttgatggtgatgatgtttGTGGAAACAATACTTGCAAAGATCCACTACGAGAATCTAATGAAATAAACGAAGAAGAGGAAAGAGGTCCAACGGAAGGACTAATTAATTATGACAAAGATAGAGAGATGGAAGATGTTGCTCAGAGGGTCAATCCTGTAGCATGTGGAGAAGAGCCAACACAAGGTTTGGAATTGAAAAAGGGTATACTTAGAGAGTCTAATGAAAAAGGTAAAGAAGAGGAAATAAGTTTAAAGGAAGGATTGATTAGTTATGACAAAAGTAGAGAGATagatgttgctcaatgggtcaATCCGACTGTATGTGGAGAAGAGCCAACAGAAGTTTTGGAATTTAAAAAGGGTAAGCATGTATTAGATTTGGATAAAAACAAGAGAGCAAGAACCATGGTGACCCGGTCTACCAATAAAGTAGCTCAGTCCTCTTCAAATCCAAAGCAGATTCTGAAATCTTCTAGCATATTGAAGGGTGGACTAAAAAATGATCAACATTCAATGACTCAAATTCTAACTGAGTCACTAGCCTGTAACAAAATTGATAATGTTCCACACAAAATTGATCAATGTAAAGATGATCAGAACGTTATtgcaaaaaacaaacttaaacaAAGCCGTAAAGAAAACGTGGCAGAAGATAACTCCATGACTTCTAAGGTGGAGAAAAAAACATTTCCATCTTTTGAATCTTTTACAatagaggaagaagaaggttcAGGTGGTTATGGCATTGTTTACCGTGCCCAAAGAACAACTGATGGAAAAAGACTTGCTATAAAATGTCCTCATAGTAATGCTCATAAAAACCATGTGAATAATGAGAGGAATATGCTTGAGCGTTTTGGGGGTAAAAGCTTTATTATAAAGTTTGAAGGTTCGTTCAAAAGTGGCAACAGTGACTGCTTTGTTTTAGAACATGTTGAGCACGACAGACCTGAGgttttgaaaaaagaaattgatatCAGTGAGCTTCAGTGGTATGGGTTTTGCATGTTCAAGGCACTTGCGTGCTTGCACAGAGAGGGAGTCGTTCACCGAGATGTCAAACCTGGAAACTTCCTTTTCTCTCGAAAGCTTAAGAAAGGCTACCTTATCGACTTCAACCTTGCCATGGATTTAAAGCAGAAATACAATATTGGAAGTAAGCCTCATAATTTTGACCTATTTGGTAAATCAAAACCAAGCcttgatgcatccaataatattcCTCTGCCTTCTGGTCCTTCCCCGGTGGTTCAAGACAAGAACCTTGGAGGAAAGTCTCTAACATCCAATAAAAGGGACTTGATAGATCATAGGAAATATTCTGAAATTAATAGGCATATGAAGCCAAAGGCTAATGCTGGCAATCTGAAAAATTGTCCTGATAAGGCTGTTGTGAATTTACGTAGAGCACCAGGAGCAGATGGCTCAGGTATAACCTCTGCCAAAGATATTACTAGCACTAAGACTGCTTCTGCTGATAGGCTCCGAGAACCCATACCTTTCCGAGGAAGAAAGGAGCTTATCAGCCTCGTGCAGAATTCTATGCAATGTGCAAACAGTAGTTCAATTAGAAGTCCTTCTTCTCAGAGGAAAAGGGTTACTGCTCCTTCAAGCAAGGCAGATGGCAGGACACTTCATCTTACGCCGATGCCTATACATGCATCTACGGTTGTTGTGGGATCATTTAGAAGCAAAGGGGATGGAAAACATAAAAGAGAGGGTCCTTGTGTTGGAACAAAGGGATTTCGTGCCCCAGAGGTTTTGTTGAGGTCTCAGATTCAGGGAACAAAGGTTGATATTTGGTCAGCTGGAGTCACTCTACTATACATGCTGATGGGAAAAACTTCTTTCCCTGGCGAACCAGAACAGAGTTTAAAAGAGATTGCCAAATTGCGGGGCAGTGAAGAGCTTTGGGAAGTGGCCAAGCTGCATGACCGTGAAGCATCCTTTCCATTGGAGCTATTTGATGACCAGTACTTGAAATCATGCGACATAGAAACCTGGTGCAAGAGACACACAAAAAGACCAGAGCTTGTTGATCAAGTCCCGAAATCATTGTTTGATTTAATAGACAAGTGTCTAACAGTAAACCCAAGGAGTAGGATTAGTGTTGATGAAGTTCTAAGGCATGATTATTTTTCTCATATTAATCGTATCCTGAGAAAGCAAAGGATGATGCGACTCGGCTTAGACACTGACGATTAA 3033 0.3871 MSPPESQLDPNPFFHEHSWHLLSLLFQIGHPVDADYLSSRCRLFNASPDFIRFVASLSDYPLSINSNGLIIPSVTAFVSIARFFNFYFDNSTPSNSRKRKSILSITEGERDAKRIAIGDKVPEIFVKSFSDTTVEDVMRRSFFAMQSESRIMHGGNPMIPIRIDTIGGYSGCSEQNFEYREADNDGITNTAQGDISGALIKTSESFFINESGLMKLDQDLDRLAWNNSFVSLAPPTNVQDQSPCNEGGVVSIGSEKKMDCLDTFGNEYPEQNITPTVDGDDVCGNNTCKDPLRESNEINEEEERGPTEGLINYDKDREMEDVAQRVNPVACGEEPTQGLELKKGILRESNEKGKEEEISLKEGLISYDKSREIDVAQWVNPTVCGEEPTEVLEFKKGKHVLDLDKNKRARTMVTRSTNKVAQSSSNPKQILKSSSILKGGLKNDQHSMTQILTESLACNKIDNVPHKIDQCKDDQNVIAKNKLKQSRKENVAEDNSMTSKVEKKTFPSFESFTIEEEEGSGGYGIVYRAQRTTDGKRLAIKCPHSNAHKNHVNNERNMLERFGGKSFIIKFEGSFKSGNSDCFVLEHVEHDRPEVLKKEIDISELQWYGFCMFKALACLHREGVVHRDVKPGNFLFSRKLKKGYLIDFNLAMDLKQKYNIGSKPHNFDLFGKSKPSLDASNNIPLPSGPSPVVQDKNLGGKSLTSNKRDLIDHRKYSEINRHMKPKANAGNLKNCPDKAVVNLRRAPGADGSGITSAKDITSTKTASADRLREPIPFRGRKELISLVQNSMQCANSSSIRSPSSQRKRVTAPSSKADGRTLHLTPMPIHASTVVVGSFRSKGDGKHKREGPCVGTKGFRAPEVLLRSQIQGTKVDIWSAGVTLLYMLMGKTSFPGEPEQSLKEIAKLRGSEELWEVAKLHDREASFPLELFDDQYLKSCDIETWCKRHTKRPELVDQVPKSLFDLIDKCLTVNPRSRISVDEVLRHDYFSHINRILRKQRMMRLGLDTDD 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00084 1010 MobiDBLite consensus disorder prediction 794 811 - -
Tsu08g00084 1010 MobiDBLite consensus disorder prediction 746 768 - -
Tsu08g00084 1010 Gene3D Transferase(Phosphotransferase) domain 1 830 1004 - -
Tsu08g00084 1010 SMART serkin_6 512 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00084 1010 MobiDBLite consensus disorder prediction 686 705 - -
Tsu08g00084 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Tsu08g00084 1010 ProSiteProfiles Protein kinase domain profile. 512 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00084 1010 SUPERFAMILY Protein kinase-like (PK-like) 497 994 IPR011009 -
Tsu08g00084 1010 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 483 991 - -
Tsu08g00084 1010 MobiDBLite consensus disorder prediction 794 819 - -
Tsu08g00084 1010 Gene3D Transferase(Phosphotransferase) domain 1 475 666 - -
Tsu08g00084 1010 Pfam Protein kinase domain 852 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00084 1010 Pfam Protein kinase domain 514 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00084 1010 PANTHER CASEIN KINASE-RELATED 483 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00084 Tsu-Chr8 782515 789410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00084 853 989 Core Cell Cycle Gene Families AT3G48750 34.043 1.85e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Tsu08g00084 Pkinase 1.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00084 K02214 - gmx:100795742 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00084 08 782515 789410 Tsu08g00084 08 782515 789410 ECH