Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00082 ATGAGTGATAACGAAGAAGGCAGTAAGTCTGAAGGAGAAGTTGAGTTGTCATCGACTGACAATAGTGAAGAAGAGGAATGTGATGTAGAGCTGATAAACATTAATTGCATGGCAGACATTATGAAGATTGATATGAACAACATATCGGTAGACGAAGTTGGAAGGTATAGTTTTTCTGATCTTGCGATTGCTTACAAGTTCTACTACTGGTATGGAAGAACAACTGGGTTTTCTGTGCGCAAGAGTTGTTATGTGAGGAATGCTGCTGGTGAGATTGTTCAGAAAACGTTTTTATGTTCTCGCGAAGGGTATAGAGAATCTAATGCATTAACACTAGAGAAACGGAAGCGTGAGCCAACAAATGAAACTAGGTGTGGATGTGGAGCGAAATTGACAGTGCACATAGATATTATTACCAACCGTTGGTATGTCACGTTATTTCAATTTGATCATAATCATGCACTGTTAGATGGGACTATGTGTGGTATGTTACCGGCACATAGAAAGCTGACTGAGAAGGATGTTCAGGATATTGAGAGTCATGGAAATGTTGGGATTAGACCATATCAAATGTATGGTGCAATGGCTAATTCAGCTGGGGGTTTCCACAAGGTAGGCTTtgtaaaaaaagatttatacAACCAGCTCAAGAGACAAAGGAAAATAATTGCATCTGATGCTAGTGAAGCTGTGAAATATCTGTATGATCTGGGAAAGCAAGACCAACTGATGTATGTTGTGCACAAATTTGACAATGAAAATAGGCTAGAACGACTATTTTGGTGCGATGGAGAAAGTAGGAAGAACTTTGAAGTCTTCGGTGATGTTTTAGCCTTCGATGCCACTTACCGGAAGAACAAATACAATTGCCCGTTTGTTGTGTTCTCCGGTGTTAACCATCACAATCAAACCATAGTTTTTGCAACCGGTCTTGTGACAAGGGAGACTGAAGAAACGTATGTGTGGTTGTTAGAGCAATTTGCATGTGCAATGCAAGGCAAGACCCCAATATCTGTGATCACAGACGGTGATATTGCAATGAAAAATGCTATCAGGAAAGTGTTTCCCAAAGCCCATCACCGATTATGTGCGTGGCATCTACTAAGAAATGCTTCGACAAATGTTGGGATACCTGATTTCATGCGGTACCTGAAGCGATGCATGTTGGGTGACATTGAGATCAACAAGTTTGAAGAGCTTTGGGGTGACATGTTAGAAAAGTTTGGTTTGGAAGACAACAAGTGGATTAAAGAAATGtatgcaaaaagaaaaatgtggtCTACAGCTTACATCAGGGGATTTTTCTTTGCTGGATTAAGGACAACCTCTCGCTGTGAGGCTCTCCATAGCCACCTTCGCCAATTTGTTCATTCAAGGATCAACctacttaactttgttcaacAATTTCAAAGATGCCTAACTTATTTTCGATTTAGGGAAATTGAAGCTGATTTCCGCTCTAATTATGGACAACCTGTCATGCAAAGTAGTCTCCATAGTATCGAGAGATCGGCTGCTAGTCAATATACAAAGGAGATTTTCAACATGTTTAAAGTTGTTCTTAGTAAATGTATGTTTTTGAAGGTATTGGAAGTACAACAAATGTCAAGCTGTTGCATTTACAAAGTGGCGAAGTATTGTGGTAATGGTGATGCTTGGTATGTTACACATTCTGCATATGCTGaggaaaaattcaaatgttCGTGTCTTAGAATGGAATCAATTGGATTGCCGTGTGATCACATTGTGTGTGTTTTGGTATATCTTGACATTGATGAACTTCCTAAGTGCTTGGTATTGCCGAGGTGGACAAAAATTTCTAAAGATTCAATTATTGGTAGTTATCCCGGGGGAAGTCTTTATTGGGATTCACAAGTTGCAGCTCGATATTCTAGTTTGGTGAAGATGTCAAAGGACGTTGCTGAGTTGGTGTATGATGATTTGAATGATTACAACCATGTTGTTGATGTTCTCCACACTGAATTAAAGCGTCTTAAAGCTAAGCATCATGGCAAAGGACGTAAGACAAATGTTCGTAGTGGTACCATCGATGTAGATGTGTTGGATCCTCCACAAGTTAGAACCAAGGGATGTGGTTCTAATCCTACACCGACACCTAGTAACCGTAGACGTGGCCCAACTTGCGGAGGATGTGGCATCATTGGTCATAACAGACGTTTCTGTCGGAATGCAAGCATTGTTCATCCTGCAATCACACCTCCTCCCAACTATGATAATCTTGTAAGTACATAA 2253 0.3919 MSDNEEGSKSEGEVELSSTDNSEEEECDVELININCMADIMKIDMNNISVDEVGRYSFSDLAIAYKFYYWYGRTTGFSVRKSCYVRNAAGEIVQKTFLCSREGYRESNALTLEKRKREPTNETRCGCGAKLTVHIDIITNRWYVTLFQFDHNHALLDGTMCGMLPAHRKLTEKDVQDIESHGNVGIRPYQMYGAMANSAGGFHKVGFVKKDLYNQLKRQRKIIASDASEAVKYLYDLGKQDQLMYVVHKFDNENRLERLFWCDGESRKNFEVFGDVLAFDATYRKNKYNCPFVVFSGVNHHNQTIVFATGLVTRETEETYVWLLEQFACAMQGKTPISVITDGDIAMKNAIRKVFPKAHHRLCAWHLLRNASTNVGIPDFMRYLKRCMLGDIEINKFEELWGDMLEKFGLEDNKWIKEMYAKRKMWSTAYIRGFFFAGLRTTSRCEALHSHLRQFVHSRINLLNFVQQFQRCLTYFRFREIEADFRSNYGQPVMQSSLHSIERSAASQYTKEIFNMFKVVLSKCMFLKVLEVQQMSSCCIYKVAKYCGNGDAWYVTHSAYAEEKFKCSCLRMESIGLPCDHIVCVLVYLDIDELPKCLVLPRWTKISKDSIIGSYPGGSLYWDSQVAARYSSLVKMSKDVAELVYDDLNDYNHVVDVLHTELKRLKAKHHGKGRKTNVRSGTIDVDVLDPPQVRTKGCGSNPTPTPSNRRRGPTCGGCGIIGHNRRFCRNASIVHPAITPPPNYDNLVST 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00082 750 PANTHER OS02G0262500 PROTEIN 63 694 - -
Tsu08g00082 750 MobiDBLite consensus disorder prediction 696 710 - -
Tsu08g00082 750 MobiDBLite consensus disorder prediction 1 25 - -
Tsu08g00082 750 SMART 26again6 565 592 IPR006564 GO:0008270
Tsu08g00082 750 MobiDBLite consensus disorder prediction 690 713 - -
Tsu08g00082 750 Pfam MULE transposase domain 276 370 IPR018289 -
Tsu08g00082 750 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 694 IPR031052 GO:0006355
Tsu08g00082 750 Pfam FAR1 DNA-binding domain 66 156 IPR004330 -
Tsu08g00082 750 Coils Coil 648 668 - -
Tsu08g00082 750 ProSiteProfiles Zinc finger SWIM-type profile. 554 590 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00082 Tsu-Chr8 735919 738171 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu08g00082 MULE 8.7e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00082 - - ccaj:109791994 672.93