Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00068 ATGGAAAGGTATTCAGAGTCAAAGGTACTTCCTCGAAACTTGCCGATTCTGGTTGAGGTATCGCCGCACACGTCCACTGCAAGAGAGGTGGGTCAGAGTCAGAGACTAAATGGGCAGGAGTTTTCAAATGCTAGGTGGATTTCAGCAAGAGAATTGAATCAATTGTCACAGGCAAGGGATGTGCCTATGACACGTTTGGCCTCGATTCGAGAAGTGGCACAGTTATCGAATGCACGGATACTATTGGTTAGAGATGATATGGAATTTGATACTAGAGAGTCTCCTGAATCTATCTCCTTTGAGCCTACTAGAACATGGAAAGGAAAGCATTCTTTATCTGATGGAGAAGATCTGATGTATGATGTAGACACATTGAAGGGTAGCAGTGATTCGTTTGAGGATGGTGATCCAAGTTTATTTGCTGGTGCTAGTCATCCACCAGAACCTGTTGATACAGATCTTATGAGAACGGTTTATGTACCGATAGGTCAGAACAAATCTGAGGCCGGATGCTTAATTAAGAACATGTCCGTGAAGGGCCCTTTTCTGGAAGATCTCTCGATCCGTGTTCCTGGGAAGAAACCAAGTCCAATTGTTCTTTCCCCTCAAGGAAGTCTTATTGAAGAGCTAAACGACACCGGGAACATATCTTCGCCTTTTGCAGGTTCTCGAGTATCTCAGAATACTGAGAACTCTCTCCTCGCTCCAGATTCCGAGGAAAAGGATTGTGTTTGGGATGCTTCTTTGCCTCCTACTCCTAGTGGCAATGTCAGTCCACATAGTAGTATCGATAGTATTGGCGTTGTCAAGGCAATGAGCATTGCTAATAGTTGTGCTAGTACTTATCGGAGTGATGCAATGACCAGTGACGGCATGCTTAGTTTAGATAGGAACTTTGATAGCACTAAGGGTAGTGTAAGGGGTGATTCACTTGAAAGTGCAAAAACTAGTGCTAGTCGTGCAAGTGATAGTAGTGGCCTCAGCGATGACAGTAACTGGAGCAACCTTACTGGTAGTGCAAATAAGCCTCACAAAGGAAATGATCCCAGGTGGAATGCTATCCTTGCCGTCCGATTACGAGATGGAATTTTGGGCATGAGTCATTTTCGATTACTCAAACGACTTGGATGTGGTGACATTGGTAGTGTATATCTCTCAGAGCTTAGTGGAACTCGATGTTATTTTGCAATGAAAGTTATGGACAAGGCATCCCTTGCAAGCAGAAAGAAGCTGACGAGAGCACAGACAGAAAGAGAGATATTGCAGTTGCTGGATCATCCATTTCTTCCAACTTTGTATACACATTTTGAGACCGACCGTTTCTCTTGTTTAGTAATGGAATATTGTCCTGGGGGTGACCTACACACTTTAAGGCAGCGGCAACCAGGGAAACATTTCTCTGAATATGCTGCACGCTTCTATGCTGCCGAGGTCCTGCTTGCTCTCGAATATCTTCACATGCTTGGAGTTGTGTACAGAGACCTTAAACCTGAAAATGTGTTGGTACGAGACGATGGTCACATAATGCTCTCAGATTTTGATCTTTCCCTCAGATGTACTGTTCTTCCAACTCTTGTTAGAGGTTATGATGGCGACCCTTCAAAGCGGGGTGGTGGTGCATTCTGTGTTCAGCCTGCTTGTATTGAGCCAACATCAGTATGCATACAACCTGCATGTTTTATTCCTCGGCTCTTTCCTCAGAAAAACAAGAAATCGAGGAAACCAAGAGCTGAACCTGGCTTTCCTTCCAGCAGACTTCCAGAGCTTGTTGCCGAGCCTACTGCTGCTCGATCTATGTCCTTTGTCGGCACTCATGAATACCTTGCTCCTGAAATTATCAAAGGGGAAGGTCACGGAAGCGCGGTTGATTGGTGGACATTCGGAATATTCTTGCATGAACTTTTATATGGTAAAACCCCTTTTAAAGGGTCAGGAAACCGTGCTACGCTTTTCAATGTAGTAGGTCAGCAGCTCAAATTTCCCGAATCACCTGCGACCAGTTACGCCAGCAGGGATCTGATCCGTGGCTTACTCGTGAAAGAGCCGCAACATCGTCTTGGGGTTAAGAGAGGTGCGACTGAGATAAAGCAGCATCCTTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGTAGCACACCACCAGAAGTGCCAAGACCAGTGGAAAATGAGCCGCCACCGCCACCACCAATGAAGGTCGGACCACCAATTGACACTGTTGGAATTGGCAGTACTAGTAAGAGAATGTCAGGTAATAATGAAATGAAGTCCGGGGGTAAATATCTTGATTTTGAGTTCTTTTAG 2304 0.451 MERYSESKVLPRNLPILVEVSPHTSTAREVGQSQRLNGQEFSNARWISARELNQLSQARDVPMTRLASIREVAQLSNARILLVRDDMEFDTRESPESISFEPTRTWKGKHSLSDGEDLMYDVDTLKGSSDSFEDGDPSLFAGASHPPEPVDTDLMRTVYVPIGQNKSEAGCLIKNMSVKGPFLEDLSIRVPGKKPSPIVLSPQGSLIEELNDTGNISSPFAGSRVSQNTENSLLAPDSEEKDCVWDASLPPTPSGNVSPHSSIDSIGVVKAMSIANSCASTYRSDAMTSDGMLSLDRNFDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNLTGSANKPHKGNDPRWNAILAVRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVLPTLVRGYDGDPSKRGGGAFCVQPACIEPTSVCIQPACFIPRLFPQKNKKSRKPRAEPGFPSSRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENEPPPPPPMKVGPPIDTVGIGSTSKRMSGNNEMKSGGKYLDFEFF 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00068 767 SUPERFAMILY Protein kinase-like (PK-like) 350 731 IPR011009 -
Tsu08g00068 767 MobiDBLite consensus disorder prediction 297 347 - -
Tsu08g00068 767 PANTHER FLIPPASE KINASE 1-RELATED 72 767 - -
Tsu08g00068 767 MobiDBLite consensus disorder prediction 297 342 - -
Tsu08g00068 767 Gene3D Transferase(Phosphotransferase) domain 1 453 519 - -
Tsu08g00068 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Tsu08g00068 767 Pfam Protein kinase domain 598 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00068 767 Pfam Protein kinase domain 370 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00068 767 Gene3D Phosphorylase Kinase; domain 1 367 452 - -
Tsu08g00068 767 MobiDBLite consensus disorder prediction 716 735 - -
Tsu08g00068 767 CDD STKc_phototropin_like 367 717 - -
Tsu08g00068 767 ProSiteProfiles Protein kinase domain profile. 369 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00068 767 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 72 767 - -
Tsu08g00068 767 Gene3D Transferase(Phosphotransferase) domain 1 597 718 - -
Tsu08g00068 767 SMART serkin_6 369 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g00068 767 MobiDBLite consensus disorder prediction 718 735 - -
Tsu08g00068 767 MobiDBLite consensus disorder prediction 235 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00068 Tsu-Chr8 601426 604208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00068 1 767 AGC Kinase Gene Family AT2G44830 65.826 0.0 953
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu08g00068 Pkinase 2.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00068 - - mtr:MTR_8g006870 1425.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00068 08 601426 604208 Tsu08g00068 08 601426 604208 ECH
Tsu08g00068 08 601426 604208 Tsu04g01890 04 20294109 20300349 PCT