Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00053 ATGCTACTGCTCTTATCTTCACCATCCTCTTCTTCACTCATGCAATCTTTTCCATTAAAATTCCTTTGTGCTGTACAAGGACAAGGAGAATCAACTCATGGATGCACGAATCAAAAACCGAAGGATTACATAGTGCAGGATGAGAAAGTAATAAGGAGGAAACTTATGATTTCTGTTTTGGTCTCAACTTGTGTTTTTCCGACATTATCTTCTCATGCGAAGACCAAAAGTATAAATCCGTATAATGAAAAACGCGTGCTACAACAAAATAAgaatatacaaaaacaaaacaatgcaCCAGATGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAGTGGTAACACCAGATAACTATATAACGCGTGATTCGGGGCTAATATACCGAGATTTTGAAGTTGGTACAGGTGATTGTCCAAAGGATGGTCAGCagGTCACATTTCACTATGTTGGCTATAACGAATCTGGCCGCCGTATTGACAGTACATATTTGCAAGGCGCTCCTGCTAAAATTCGCATGGGTAACAAGGCATTGGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAAAGCAGGTGGAAAGAGAAGGATAATCATTCCTCCTGATCTTGGACCCCCGGTAGGACCTTCAACATTTTTCAGCTCAAAacaatttgaagtttttgatGTTGAATTAATAAGCATACAAAGCTGTGAAAGAAGAGTCTTAGTaggattttattctgatgttgTATGCAGTTGA 747 0.3601 MLLLLSSPSSSSLMQSFPLKFLCAVQGQGESTHGCTNQKPKDYIVQDEKVIRRKLMISVLVSTCVFPTLSSHAKTKSINPYNEKRVLQQNKNIQKQNNAPDDFPNFIREGFEVKVVTPDNYITRDSGLIYRDFEVGTGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGAPAKIRMGNKALVPGFEEGIRDMKAGGKRRIIIPPDLGPPVGPSTFFSSKQFEVFDVELISIQSCERRVLVGFYSDVVCS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00053 248 Gene3D - 81 236 IPR046357 GO:0003755
Tsu08g00053 248 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 144 231 IPR001179 GO:0003755
Tsu08g00053 248 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 141 227 IPR001179 GO:0003755
Tsu08g00053 248 SUPERFAMILY FKBP-like 63 230 - -
Tsu08g00053 248 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 20 248 IPR044239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00053 Tsu-Chr8 461163 464222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00053 139 233 Calmodulin-binding Proteins AT5G48570 35.052 2.50e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00053 - - mtr:MTR_8g006755 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00053 08 461163 464222 Tsu08g00053 08 461163 464222 ECH