Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00023 ATGAGAGGTTTAAACATGGAATACTACCTGCCTATAATGGTTATGGTGTTAATACAGTCTTTATATGCAGGTTTGACTCTTGGCATAAGAATTGTACTTTTGGAAGGTATGAGCCCAATGGTATTTGTAGTGTACCGCTATGCTTTTGCAACCATTGTTCTTGCTCCCATAGCTTATTTATCAGGGAGAAATTCTGGCTCATATTTCTTAAATTTAAGAAGCTTTTCCTGGATATTCATCACCTCACTAATTGGCATTACCTTGGATCAAAATTTACTTGCTGAGGGTCTATATCTAGTTTCTTCTTCAGTTACAAGTGTCATGTGCAATGTCGTTCCAGCAGTGACATTTGTAATTGCAGCTTTTGTAGGAATGGAGAAAGTGAATATTCCAAGTTTGAGAACTATAGCAAAAATACTAGGAACAATTATATGTGTAAGTGGAGCAGTGTGCATTGCATTATTGAAGGGTCCAAAGCTGCTAAATGCACAAAATGTTGTACCTCCAAAATCAATCATGGGCACAACCTTAGGAAATGATGAGAATTGGTTGCTAGGATGTCTAATTCTTTTTGGAAGTTGTGTTGCTTGGTCAGTTTGGCTGATTCTGCAgGTTCCAGCTTATGCAAGCCACCCTAATTCCTTATCACTTTCAGCTTGGATGtgtttaatggcaacatttcAATCATCAGTAGTGACACTAGTCATGAAGCCAGACCTGAATGCATGGAAGATTAATTCTCTACTTCAATTTGGTTGCATTTTATATTCAggaGTTATGGGATCTGCAGTAGCATTATGTCTCCAAGCATGGTGCATTTCAAAGAGAGGACCTGTCTTCTCTGCTATGTTTACTCCTGTTTGTACAATAATTGTGACTGTATTAGCTGCCTTGTTGCTTCATGAGGAAATATACATTGGAAGCTTGATAGGTGGAATTGGAGTGATCATTGGCTTGTATATTGTGCTTTGGGGTAAAGCTGAAGATGTGATGATTGATGTAATAGAGAAGACAATTCCAAAATCTATGGTTAATGAGACAAAGGAAATTGTTGACAATAAATCTTGTGAAAAAGCATATTGTAAAGTTGATTTGGAAGAACCACTCTTATCTCAATAA 1119 0.3637 MRGLNMEYYLPIMVMVLIQSLYAGLTLGIRIVLLEGMSPMVFVVYRYAFATIVLAPIAYLSGRNSGSYFLNLRSFSWIFITSLIGITLDQNLLAEGLYLVSSSVTSVMCNVVPAVTFVIAAFVGMEKVNIPSLRTIAKILGTIICVSGAVCIALLKGPKLLNAQNVVPPKSIMGTTLGNDENWLLGCLILFGSCVAWSVWLILQVPAYASHPNSLSLSAWMCLMATFQSSVVTLVMKPDLNAWKINSLLQFGCILYSGVMGSAVALCLQAWCISKRGPVFSAMFTPVCTIIVTVLAALLLHEEIYIGSLIGGIGVIIGLYIVLWGKAEDVMIDVIEKTIPKSMVNETKEIVDNKSCEKAYCKVDLEEPLLSQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00023 372 PANTHER WAT1-RELATED PROTEIN 12 353 - -
Tsu08g00023 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 326 - -
Tsu08g00023 372 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Tsu08g00023 372 Pfam EamA-like transporter family 13 152 IPR000620 GO:0016020|GO:0016021
Tsu08g00023 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 155 - -
Tsu08g00023 372 PANTHER WAT1-RELATED PROTEIN 12 353 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00023 Tsu-Chr8 237691 240337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00023 5 372 Nodulin-like Gene Family AT4G30420 52.022 1.62e-133 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00023 - - gmx:100812331 473.011