Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00021 ATGGTGGGAAGTGATGATGATAATTGGTTGCTTGGATGTCTTCTTCTTTTGGCAAGTAGTGTTGCCTGGTCATTTTGGCTCATTTTACAGGTTCCAGCTTATGCAAGTCATCCTAATTATATATCGTTGTCAGCTTGGATGTGTTTAATTTCAACATTACAATCAGCAGTTGTAACCCTATTCTTCGAGCCAAACCTTAATGCTTGGAAGATTAACTCTCTCCTTCAATTTGGTTGCACTTTATATTCCGGAGTTATGGGATCAGCAGTAGTATTTTGTCTCCAAGCATGGTGCATTATAAAGAGAGGACCTCTTTTTTCAGCAATGTTTAATCCTCTTTTAACAGTGCTTGTGACTGTATTGGCTGCCCTGTTGCTTCATGAGGAAATATACACTGAAgCTTGA 405 0.3877 MVGSDDDNWLLGCLLLLASSVAWSFWLILQVPAYASHPNYISLSAWMCLISTLQSAVVTLFFEPNLNAWKINSLLQFGCTLYSGVMGSAVVFCLQAWCIIKRGPLFSAMFNPLLTVLVTVLAALLLHEEIYTEA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00021 134 PANTHER WAT1-RELATED PROTEIN 6 132 - -
Tsu08g00021 134 Pfam EamA-like transporter family 11 130 IPR000620 GO:0016020|GO:0016021
Tsu08g00021 134 PANTHER WAT1-RELATED PROTEIN 6 132 IPR030184 GO:0016021|GO:0022857
Tsu08g00021 134 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00021 Tsu-Chr8 223085 225171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00021 4 132 Nodulin-like Gene Family AT4G30420 58.915 2.08e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00021 - - gmx:100812331 177.178