Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04738 ATGGCCGATCTTCCTGTAGAATCGAAGAATGAAGAATTACAAGATGAAGAAAGTTTCGCATATGCTATTCAACTCTGCAACTCTGTTGTACTTTCCATGGCACTTCAATCCGCAACTGAACTCGGCGTATTTGAAGTCTTGCAAAAGGCCGGTACAGATGCTAAACTCTCCGCCGATGAGATCGCTTCTCGTCTTTCCTGTACCAATCCAGATGCCTCCAAAATGTTAGATCGAATTCTCGCTCTTCTTGCCTCTCACTCCGTCATCAAATGTTCTGTACTTCCCGATCAACATAACTTTGGATCCTTTCATAGATTCTACACTATGTCTCCTGTTGCCAAATTCTTTGCTCCTAATTCCGATGGCGTTTCTTTAGGTCCCTTGATTGCTTTGCATCATGATAAGATCTTCTTAGATAGCTGGTCTCAGCTTAAAGATGCAATTCGAGAAGGGGGTGTTCCATTCAACAGGGTTCATGGCACGCATGCATTTCAGTATCCCAGTTTGGACTCACGGTTCAATCAAGTTTTTAATACTGCAATGATCAATCACACAACTATTGTTATGAAGAAGGTACTTGAATGCTACAAAGGTTTTGATGAGGTTAAAAGGCTTGTGGATGTTGGTGGTGGTCTTGGGGTTAACATTAACTTGATCACTTCAAAATACCCTCATATACAGGGTATCAATTTCGACTTGCCTCATGTCATACAACATGCTCCTTCCTATCCCGGAATTGAACATGTTGGGGGAGATATGTTTGAAACTGTGCCTAAAGCAGATGCCATCTTTATGAAGTGGATACTTCATGACTGGAGTGATGAGCAGTGCTTGAAGCTTTTGAAGAATTGCTATGATGCTATTCCAGATGATGGAAAGGTGATTGTTTTGGAGGCTGTTCTTTCTATTATACCGGAGAATAATGCTGCCTGGAAATTTGCAGCCCAGTCAGATGTTCTGATGATGACTCAAAATCCAGGAGGGAAAGAGCGAACTGAGCAAGAATTCATGGATTTAGCAAATGGAGCTGGATTTAGTGGCATTAGATATGAATGTTATGTCCATACTTTTTGGGTTATGGAGTTCTTCAAGTAG 1095 0.4146 MADLPVESKNEELQDEESFAYAIQLCNSVVLSMALQSATELGVFEVLQKAGTDAKLSADEIASRLSCTNPDASKMLDRILALLASHSVIKCSVLPDQHNFGSFHRFYTMSPVAKFFAPNSDGVSLGPLIALHHDKIFLDSWSQLKDAIREGGVPFNRVHGTHAFQYPSLDSRFNQVFNTAMINHTTIVMKKVLECYKGFDEVKRLVDVGGGLGVNINLITSKYPHIQGINFDLPHVIQHAPSYPGIEHVGGDMFETVPKADAIFMKWILHDWSDEQCLKLLKNCYDAIPDDGKVIVLEAVLSIIPENNAAWKFAAQSDVLMMTQNPGGKERTEQEFMDLANGAGFSGIRYECYVHTFWVMEFFK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04738 364 PANTHER O-METHYLTRANSFERASE 14 364 IPR016461 GO:0008168
Tsu07g04738 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 362 IPR029063 -
Tsu07g04738 364 PIRSF O-mtase 2 364 IPR016461 GO:0008168
Tsu07g04738 364 Pfam Dimerisation domain 33 84 IPR012967 GO:0046983
Tsu07g04738 364 Pfam O-methyltransferase domain 141 346 IPR001077 GO:0008171
Tsu07g04738 364 Gene3D - 5 116 IPR036388 -
Tsu07g04738 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 364 IPR016461 GO:0008168
Tsu07g04738 364 Gene3D Vaccinia Virus protein VP39 118 364 IPR029063 -
Tsu07g04738 364 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 14 364 - -
Tsu07g04738 364 SUPERFAMILY "Winged helix" DNA-binding domain 14 119 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04738 Tsu-Chr7 51682238 51686004 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04738 12 364 Monolignol Biosynthesis Gene Families AT5G54160 51.558 1.20e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04738 K13066 - gmx:100803633 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04738 07 51682238 51686004 Tsu07g04738 07 51682238 51686004 ECH