Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04736 ATGGCTCCTTCAACAACTGATGAATCTAGTAAACAACAAATCCAAGACAAGCATCTcaaaccacaacaacaacaagatgatgatgaagaagcccTCCAATTTGCCTCACAACTAACAGGTTCCATTGTTGTTCCATTGGCTTTGCGGTCAGCCATTGATCTTGGCATCTTTGACATTCTAGCCAAAGCAGGTGAAGGAGCTCAACTCTCTGCACAAGACATTGCTGTTAAGATTGGAACCAACAACCCTCAAGCACCAACAATGTTAGATCGTCTTCTTAGGTTGTTGGCCAGTCactccattctaaactcctctgttCCTCAACATCCACAAAGCCTTCAAATATTCTACAGCCTCTCTAATCACTCCAAATATTTTGTCACCGATGCtgatggcatctctttggggcCCACCTTGGCATTACTTCTCGACAATGTCTTCTACCAAAGCTGGTCGGAGTTGAAAGGAGCGATAGTGGAAGGAGGAATACCGTTCAATAGAGTATATGGAATGCATGCCTTTGAGTATCCACGTGTGGATCCAAGGTTCAATGATGTTTTCAACAAAGCTATGCTTAACTCAACAACTATTAATATGAAGAGGATTCTTGAATTTTATCAAGGTTTTGAGCATGTCACTAAGCTGGTTGACGTTGGTGGTGGTCTTGGACATAATCTCCAATTGATCACAGCCAAATATTCTCATATTCAGGGAATTAATTTTGACTTGCCTCATGTGATACAAAATGCTCCTAACTACCCAGGTAGCTACTATTACAATTGGTCAACTTAA 792 0.3687 MAPSTTDESSKQQIQDKHLKPQQQQDDDEEALQFASQLTGSIVVPLALRSAIDLGIFDILAKAGEGAQLSAQDIAVKIGTNNPQAPTMLDRLLRLLASHSILNSSVPQHPQSLQIFYSLSNHSKYFVTDADGISLGPTLALLLDNVFYQSWSELKGAIVEGGIPFNRVYGMHAFEYPRVDPRFNDVFNKAMLNSTTINMKRILEFYQGFEHVTKLVDVGGGLGHNLQLITAKYSHIQGINFDLPHVIQNAPNYPGSYYYNWST 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04736 263 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 255 IPR029063 -
Tsu07g04736 263 PANTHER O-METHYLTRANSFERASE 1 255 IPR016461 GO:0008168
Tsu07g04736 263 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 263 IPR016461 GO:0008168
Tsu07g04736 263 Pfam Dimerisation domain 47 97 IPR012967 GO:0046983
Tsu07g04736 263 Gene3D Vaccinia Virus protein VP39 127 260 IPR029063 -
Tsu07g04736 263 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 255 - -
Tsu07g04736 263 MobiDBLite consensus disorder prediction 11 27 - -
Tsu07g04736 263 Pfam O-methyltransferase domain 151 253 IPR001077 GO:0008171
Tsu07g04736 263 Gene3D - 13 126 IPR036388 -
Tsu07g04736 263 MobiDBLite consensus disorder prediction 1 28 - -
Tsu07g04736 263 SUPERFAMILY "Winged helix" DNA-binding domain 26 129 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04736 Tsu-Chr7 51667369 51669681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04736 16 255 Monolignol Biosynthesis Gene Families AT5G54160 49.378 2.12e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04736 K13066 - gmx:100789402 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04736 07 51667369 51669681 Tsu07g04736 07 51667369 51669681 ECH