Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04717 ATGTTAGGCAAAAGCTATAGACAAGTTCAGCAGCAGCAGCTCCATGGAAGAACAAAAGATATACCAAAAGGGTGCGTTGCAATAAAGGTGGGTCATGGAGAAGACCAACAAAGATTTATTGTACCACTCAATTACCTCAATCATCCACTCTTTGTTAGGCTTCTGAAAGAGGCAGAAGAAGAGTATGGTTTTTCTCAACAGGGTACTATAATCATCCCTTGTCAATTGGAAGAGTTTAAGGATATTCTTCAACACATGATTCATATTGATGATATTAATAAGTCCCTCCAACACCACCAACATCACCTCGTTGGCTGCTTCAGATCAGCTTGA 333 0.3994 MLGKSYRQVQQQQLHGRTKDIPKGCVAIKVGHGEDQQRFIVPLNYLNHPLFVRLLKEAEEEYGFSQQGTIIIPCQLEEFKDILQHMIHIDDINKSLQHHQHHLVGCFRSA 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04717 110 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 13 104 - -
Tsu07g04717 110 Pfam Auxin responsive protein 12 84 IPR003676 GO:0009733
Tsu07g04717 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04717 Tsu-Chr7 51552106 51553130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04717 20 91 Calmodulin-binding Proteins AT5G20810 47.436 1.81e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04717 K14488 - gmx:111188139 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04717 07 51552106 51553130 Tsu08g00858 08 9350193 9350972 PCT