Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04716 ATGTCGACTTCAGAGATTCTACTCCAAGAACTTGAATCACTCAAAGACCAAAAAACCATTGTTGAAGCTCAATTGGAAGATATTAATAATCTCCAAAAACACAATGGCTCTTCTTCACCTTACCCTACAAATGGATTAGAACCTCACATCATTCATAGATACAGCCACCACCTTGTTCTTCCTTCCTTTGGTGTTCAAGGGCAAGCAAATCTGTTGAAGTCCTCAATTTTAGTTGTGGGGGCTGGAGGATTGGGTGCTCCTGCGTTGTTATATTTTGCAGCTTCCGGTGTTGGTAAATTGGGAATCGTTGATCATGACAAGGTTGAGCTGAATAATATGCATAGACAGATTATACACACCGAAGCATATATTGGTCAGCCAAAAGTGAAATCCGCTGCTGCTGCTTGTCGCTCGGCTTTCCCCTTACTATATCTTTTATGTTCATTCACAAATGCACTCTCCACTTGTATCAGGTGCTGCTTTGGGAATGGAAGGGCAGCTCACTGTCTACAACCACAATGGTGGTCCTTGCTTTGCTATCGATGCCTCTTTCCAACTCCTCCACCTCGAACAGCATGCCAAAGTTGCGCTGACGGAGGAGTACTAGGAGTAGCAAATTCAATCAATCCATCAATGGGTTCAAATGCCAAAACTCATACTTTTGAGGAAATCtccaaacacaacaacaaaaaagattGCTGGATTATTGTCAATGGAAAGGTGTATGATGTGACCCCATTTTTGGATGATCATCCAGGAGGCGACGAATCTTTAATTTCATCAACAGGGAAGGATGCTACCGTTGATTTTGAAGACGTGGGTCACAGTGACTCTGCCATTGAAATGATGCATAAATACTTTATTGGGCATGTCGACACACCCACCATGCCAACCGAAGTTAAACACAATCCGCCACCATCTAAACAAACACCCAAAGTTAGCGATCAATCATCAGGATTTGTTTCAAAGGCATTGCAATTCCTGTTGCCGTTACTCATATTGGCCATTGCATTTGCTATGCAGCACtatggaaaaaagaaacaagTCAGCGACTCATAA 1059 0.4127 MSTSEILLQELESLKDQKTIVEAQLEDINNLQKHNGSSSPYPTNGLEPHIIHRYSHHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGKLGIVDHDKVELNNMHRQIIHTEAYIGQPKVKSAAAACRSAFPLLYLLCSFTNALSTCIRCCFGNGRAAHCLQPQWWSLLCYRCLFPTPPPRTACQSCADGGVLGVANSINPSMGSNAKTHTFEEISKHNNKKDCWIIVNGKVYDVTPFLDDHPGGDESLISSTGKDATVDFEDVGHSDSAIEMMHKYFIGHVDTPTMPTEVKHNPPPSKQTPKVSDQSSGFVSKALQFLLPLLILAIAFAMQHYGKKKQVSDS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04716 352 Coils Coil 4 31 - -
Tsu07g04716 352 Gene3D - 49 151 - -
Tsu07g04716 352 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 216 292 IPR001199 -
Tsu07g04716 352 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 216 305 IPR036400 -
Tsu07g04716 352 PRINTS Cytochrome B5 signature 241 251 IPR001199 -
Tsu07g04716 352 PRINTS Cytochrome B5 signature 266 273 IPR001199 -
Tsu07g04716 352 PRINTS Cytochrome B5 signature 279 291 IPR001199 -
Tsu07g04716 352 PRINTS Cytochrome B5 signature 251 265 IPR001199 -
Tsu07g04716 352 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 51 208 IPR035985 GO:0008641
Tsu07g04716 352 MobiDBLite consensus disorder prediction 294 315 - -
Tsu07g04716 352 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 247 254 IPR018506 GO:0020037
Tsu07g04716 352 SMART Cyt_b5_2 219 292 IPR001199 -
Tsu07g04716 352 Pfam ThiF family 54 142 IPR000594 -
Tsu07g04716 352 PANTHER CYTOCHROME B5 ISOFORM C 212 347 - -
Tsu07g04716 352 PANTHER CYTOCHROME B5 212 347 - -
Tsu07g04716 352 Pfam Cytochrome b5-like Heme/Steroid binding domain 220 291 IPR001199 -
Tsu07g04716 352 Gene3D - 213 294 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04716 Tsu-Chr7 51546780 51550724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04716 212 347 NADPH P450 reductases AT5G48810 55.882 5.37e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04716 K11996 - gmx:100814736 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04716 07 51546780 51550724 Tsu08g00870 08 9530077 9535108 PCT