Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04667 ATGGAAAATACTACTAAGAGAAAACGTGTTAGTCTGAtcaatgaattggtccaaggAAAGGAGCTAGCAAAGCAACTAAGCAACCATATAGTTTTATCTTCCAATGAAACCAATGAATTCTTGATTGACAAAATAATTTCCAACTATCAAAAAACACTTACTATTCTCAACCATTTGCCTAATGTGGAAGGAGAAAATAAAACCGATGATGGTAACATGAAGGATTCTCATTGTTCTTTTACAAATGAAAGTCCCAAAAGTGAGGTTATTATTAAGCACAAAGCTCTCTTCAAGAAAAGGAAGAGCATGGACACATGGAAAGAGCAAGTGAAGATTTGCACAAACACAGGATTGTTTGAAGGGTCTTTGGATGATGAATATAGTTGGAGAAAATATGGTCAAAAGGATATTCTTGGAGCTAAGTTTTCAAGAGGATATTACAGATGCACACATAGAAATGGACAAGGGTGCCTAGCAACAAAGCAAGTTCAAAGGTCAGATGAAGATCCAACAATAATTGAGGTTACTTACAGAGGAAGACACACATGCTCTCAATCTAAGCCTTTAAGAAAGGATTTTCCCtcaaaattaaagataataGGTTTAGACAAAAATGATAAAGATAATCAACTACAACAAACACAAGAGGCTAGTTTCATTTTGAAACAAGAATTTGATGTGAAAAGAATGGACTTAGAAAAAACCAAACAAGATATCTTCCCTTGGTTTTGTTTTCCTTCTCCATCAATTCAATCAGAAAATGAGACAATGATAGAAAGTTTTTCAGAAATTTCACCAGAATATCAATTCATATCACCAGAAATTTCAGAAGCAAACTTTTTTAGTTTGTCAGAATATCAATTGGGCTGCATTGGATTATGCCAAAATGTACAAACTTCAGAATCTGATATCACTGAGACAGTTTCAGCCACAACTTCAGTCACCAATTCACCAATCCTTGATTTGGATATTTTGTTACATAGAGGGGATTTTGACACTGATTTTCCTTTTAACACCCCTCAATATTTCTCTTCATAA 1038 0.3304 MENTTKRKRVSLINELVQGKELAKQLSNHIVLSSNETNEFLIDKIISNYQKTLTILNHLPNVEGENKTDDGNMKDSHCSFTNESPKSEVIIKHKALFKKRKSMDTWKEQVKICTNTGLFEGSLDDEYSWRKYGQKDILGAKFSRGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYRGRHTCSQSKPLRKDFPSKLKIIGLDKNDKDNQLQQTQEASFILKQEFDVKRMDLEKTKQDIFPWFCFPSPSIQSENETMIESFSEISPEYQFISPEISEANFFSLSEYQLGCIGLCQNVQTSESDITETVSATTSVTNSPILDLDILLHRGDFDTDFPFNTPQYFSS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04667 345 SUPERFAMILY WRKY DNA-binding domain 122 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g04667 345 Gene3D WRKY domain 109 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g04667 345 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 341 IPR044810 GO:0003700
Tsu07g04667 345 Pfam WRKY DNA -binding domain 124 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04667 345 ProSiteProfiles WRKY domain profile. 123 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04667 345 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g04667 345 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04667 Tsu-Chr7 51196621 51198208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04667 8 189 WRKY Transcription Factor Family AT4G11070 47.619 1.88e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g04667 WRKY 6.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04667 - - mtr:MTR_7g117200 493.812