Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04652 ATGGCTACGTTTCTAAAGAATCTTTTCGGGTCCCCTTACCAAAAGTATAATTTCAAAGCTGAACGGTTTAATAAAGACCCTCTGGCGTGGTTGAGACCACTGGTTAGGCATCACTGTGGCGAATTCTCCATGGCTGCTGTTCAGGCGAATATGAATATGGAAGATCAGAGCCAAGTTGAAGTTGGCACTGATGCACTCTTTGTTGGAGTTTATGATGGCCATAAAGGCGACACCGCTTCCATCTATCTTAGAAATCACATCTTCAGTGAACTATTAAGGCTTATTCAGCAGAAGAATAATAACAATATGAATGAGAGTATTCTGAGGCAAGTTATTGACCAAATGGAGAAAGGTTTTATTGAGTTTGCTAGAAATAGTTTTGAGCAACAGCATCAGCTACAGAATAGTTTTGTTAGTTCAGGATGTTTGATTTGTATCATATGGAAAGGGAAGTTATTTGTCGCCAACGTTGGAAACTCGCGCGCTATACTCGGTTCTCAGAAAGGCATTggtcaaattaaaaaattggttGTTAAACAGATGTGTAGAGATCACAATTTTCTAAATATTGATATTCAGCAAGAACTCGATGAATTGCATCCAGATAATAATCGTAGTTGCTACCAAAGTATTGAAGGTAAAGGCTTAATCGAGACAAGTAGATGTATAGGATATGCATATATGAAAAACTCAGAGTTCACCAAGAGGAGATCATTCGAAATCCCAGTGTCTGAAGTAGTGATTCCAACTTTTACAGAACCTTTGCTAACATCAGAACCAGATGTTTATTCAAGAGACTTAAAAGATAGtgatagattcattatatttggATCTGGTGGATTTTGGAAATTGATTTCAAACGAGAAGGCTGCTAGAGTTGTTAACACCAGTCCACGAGATAGAATCGCGGAAACACTTGTCAAGCTTGCTCAAGAGGAGGGGGCTACTAAAAGGGGGAAAAAATATCGTGACCTTATAGAGATTCCTAATAGTAACTGTGTTAGCGGGAACAATGGCAATCGAAATACTGGATTTAGATCGGCTTATCATGATGATATAACTGTGATTGTTGTATATTTGGACCAAAGGCTAAAGGGTTTGAAGCCAGAGATCAACTCCTATAAAGGCTGCAATTACGCAGTTCAACAATCAgagtttacaaatttatataataatgcTAATGAGTGA 1188 0.367 MATFLKNLFGSPYQKYNFKAERFNKDPLAWLRPLVRHHCGEFSMAAVQANMNMEDQSQVEVGTDALFVGVYDGHKGDTASIYLRNHIFSELLRLIQQKNNNNMNESILRQVIDQMEKGFIEFARNSFEQQHQLQNSFVSSGCLICIIWKGKLFVANVGNSRAILGSQKGIGQIKKLVVKQMCRDHNFLNIDIQQELDELHPDNNRSCYQSIEGKGLIETSRCIGYAYMKNSEFTKRRSFEIPVSEVVIPTFTEPLLTSEPDVYSRDLKDSDRFIIFGSGGFWKLISNEKAARVVNTSPRDRIAETLVKLAQEEGATKRGKKYRDLIEIPNSNCVSGNNGNRNTGFRSAYHDDITVIVVYLDQRLKGLKPEINSYKGCNYAVQQSEFTNLYNNANE 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04652 395 Gene3D - 19 366 IPR036457 -
Tsu07g04652 395 PANTHER ALPHABET, ISOFORM E-RELATED 20 364 - -
Tsu07g04652 395 ProSiteProfiles PPM-type phosphatase domain profile. 38 360 IPR001932 -
Tsu07g04652 395 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 20 364 - -
Tsu07g04652 395 Pfam Protein phosphatase 2C 64 317 IPR001932 -
Tsu07g04652 395 CDD PP2Cc 42 360 IPR001932 -
Tsu07g04652 395 SUPERFAMILY PP2C-like 30 361 IPR036457 -
Tsu07g04652 395 SMART PP2C_4 35 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04652 Tsu-Chr7 51083761 51085362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04652 28 387 PP2C-type Phosphatase Gene Family AT5G06750 39.566 1.27e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04652 K01102 - gmx:100806476 267.7