Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04649 atgagttGCTTTCCTTGTTTTACCTCTCAAAAGAGTAAGAAAAGCAATAGCAAGAGAGAACATGGGGATGCACAACCACAGGAAAACAACAATCTTATAACAAGCAAACCAGATATCAAGAAACCAAAGCCAGAAGATCCAAGCCAAGTTGACACAACAACTATTCAAGCACAAAATTTCACTTTCCGCGAGTTAGCAATTGCAACAAAGAATTTTCGCCAAGAATGTTTGTTGGGAGAAGGTGGTTTTGGCAGAGTTTACAAAGGAACAATTCCTGCAACTGGACAGGTGATAGCGGTGAAACAACTTGACCGAAATGGGATTCAAGGCAGTAAAGAATTTCTGGTTGAGGTTTTGATGTTGAGTCTCTTAAACCATGAAAATCTTGTCAAACTCTCCGGTTATTGTGCTGATGGTGATCAACGTCTTTTGGTCTATGAATTCATGCCAGCCGGATCTCTAGAAACTCGTCTTCTTGAGAGAAAACCTGATCAAGTTCCATTAGATTGGTATGAAAGAATGAAAGTAGCATCTCATGTTGCAAAAGGACTATGGTACTTGCATGACAAGGCAAATCCCTCAGTTATATATAGGGACTTGAAATCGTCGAACATCTTGCTTGATAATGAACTTAATGCAAAACTATCTGATTATGGACTTGCAAAACTTGCTGGTAAAGATAAGATGAACATTGTTCCTACAAGAGTCATGGGTACTTATGGTTATAGTGCTCCTGAGTATGTAAGAACAGGTAACCTCACTTTGAAGTCAGATGTATACAGTTTTGGAGTTGTCTTGCTAGAACTCATAACCGGAAGACGAGCTGTTGACACCACAAAATCACACGACGAGCAAAATCTAGTTTCATGGGCACAACCAATATTTAGAGATCCAAAAAAATATGGAGATTTAGCTGATCCAAATCTCGGTACAAATTACCCGGAAAAGGATCTGAATCAAGTTGTTGCAATTGCAGCCATGTGCTTACAGGAGGAATCAGCAGCGCGTCCTTTGATGAGCGATGTTGTAACTGCTTTGAGTTTTCTTTCTACTGCTCCTCCTCCAGGAAGTGCTCCTGCACCAACTCCAACTCCAGCTCCACCTCCGAAATCCACCTCCCAGAAGACTGTTTCCACTGCCAACGAAAGTGACAGTGACAGCGGAAGTTCTGATGAAGAGCGCGAGGGCAATCATGATATTGCAGCAGCTAGTGGAAAATACGAAGAATGTGATGATGCATCATCAGGCAGTGAAAGTGATTATTATGAGGATGAAAACCAACCTGATTATAGTCCACAAGATGATAAGTTCTACTCCAAATCAAGCAACAAAAGCAGGACCAAATCAAAGAAAGGTTCCAAAAAGCATGGGGCAGATGGAAGTTTAAGTCAGAAAAGCAGCAAAAAATCTGATGCAAACCCGAACAGCAGTAAAAAATCTTCTGGAAGAAGTAAATCATCTGATAGCAGCAGCGACGAGGAGTCACAAGATGGAGGTGTTCTTCTCAAGCGCGGTGACAGTAGGCCATCAGATAATGCAAATGGATATTCTTTTGGCCTAACAAGCAGTGATAGTGGGGATGTATCACGTTCAGAAGTTCATAATTTTGATCGCATGAGCACGGGGACATCCGAGGGGGGAAGTTTTCACCGTTTAGAACATTCCAGCAGCAGAGGATCAGATGAGGGAAGTGTTCATTCATGA 1704 0.4161 MSCFPCFTSQKSKKSNSKREHGDAQPQENNNLITSKPDIKKPKPEDPSQVDTTTIQAQNFTFRELAIATKNFRQECLLGEGGFGRVYKGTIPATGQVIAVKQLDRNGIQGSKEFLVEVLMLSLLNHENLVKLSGYCADGDQRLLVYEFMPAGSLETRLLERKPDQVPLDWYERMKVASHVAKGLWYLHDKANPSVIYRDLKSSNILLDNELNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAVDTTKSHDEQNLVSWAQPIFRDPKKYGDLADPNLGTNYPEKDLNQVVAIAAMCLQEESAARPLMSDVVTALSFLSTAPPPGSAPAPTPTPAPPPKSTSQKTVSTANESDSDSGSSDEEREGNHDIAAASGKYEECDDASSGSESDYYEDENQPDYSPQDDKFYSKSSNKSRTKSKKGSKKHGADGSLSQKSSKKSDANPNSSKKSSGRSKSSDSSSDEESQDGGVLLKRGDSRPSDNANGYSFGLTSSDSGDVSRSEVHNFDRMSTGTSEGGSFHRLEHSSSRGSDEGSVHS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04649 567 MobiDBLite consensus disorder prediction 1 52 - -
Tsu07g04649 567 Pfam Protein kinase domain 74 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04649 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Tsu07g04649 567 MobiDBLite consensus disorder prediction 353 567 - -
Tsu07g04649 567 MobiDBLite consensus disorder prediction 551 567 - -
Tsu07g04649 567 CDD STKc_IRAK 78 346 - -
Tsu07g04649 567 MobiDBLite consensus disorder prediction 354 370 - -
Tsu07g04649 567 MobiDBLite consensus disorder prediction 485 501 - -
Tsu07g04649 567 MobiDBLite consensus disorder prediction 414 428 - -
Tsu07g04649 567 ProSiteProfiles Protein kinase domain profile. 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04649 567 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Tsu07g04649 567 MobiDBLite consensus disorder prediction 390 406 - -
Tsu07g04649 567 Gene3D Transferase(Phosphotransferase) domain 1 149 350 - -
Tsu07g04649 567 SMART serkin_6 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04649 567 MobiDBLite consensus disorder prediction 463 484 - -
Tsu07g04649 567 MobiDBLite consensus disorder prediction 371 385 - -
Tsu07g04649 567 Gene3D Phosphorylase Kinase; domain 1 34 148 - -
Tsu07g04649 567 SUPERFAMILY Protein kinase-like (PK-like) 58 375 IPR011009 -
Tsu07g04649 567 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 441 - -
Tsu07g04649 567 PANTHER OS07G0668900 PROTEIN 1 441 - -
Tsu07g04649 567 MobiDBLite consensus disorder prediction 510 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04649 Tsu-Chr7 51071778 51074429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04649 1 395 Glycoside Hydrolase AT3G07070 58.738 3.66e-166 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tsu07g04649 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04649 - - gmx:100807682 640.188