Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04623 ATGAAAGCTGGGAGGGTAGTAATGGAGCTATTTGCTGATGCTGTCCCGAAAACAGCTGAAAACTTTAGGGTTCTCTGCACCGGCGAGAAGGGAATTGGACAATGTGGTAAACCTTTACACTACAAAGGTTCTGGTTTCCATCGTATTATTCCAGAATTTATGTGTCAGGGAGGAGATTTTACTAGAGGCAATGGGACTGGTGGAGAGTCTATTTACGGGGCTAAATTTGCCGACGAGAATTTTAAGCTGAAACATACTGGACCTGGTATTCTTTCCATGGCAAATTCTGGACCTAATACAAATGGTTCCCAATTCTTTATATGTACTACCAAGACTCCATGGCTTGATGGAAAACATGTTGTATTTGGGAAAGTGGTTGATGGATACAGTGTAGTTCAAGAAATGGAGAAGGTGGGTTCACAAAGTGGCAGAACATTAGAACCAGTTGTAATTGAAGATTGTggacaaataaaagataattaa 483 0.3975 MKAGRVVMELFADAVPKTAENFRVLCTGEKGIGQCGKPLHYKGSGFHRIIPEFMCQGGDFTRGNGTGGESIYGAKFADENFKLKHTGPGILSMANSGPNTNGSQFFICTTKTPWLDGKHVVFGKVVDGYSVVQEMEKVGSQSGRTLEPVVIEDCGQIKDN 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04623 160 PIRSF Peptidylpro_ismrse 1 160 IPR024936 GO:0003755
Tsu07g04623 160 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 156 IPR002130 GO:0000413|GO:0003755
Tsu07g04623 160 SUPERFAMILY Cyclophilin-like 2 157 IPR029000 -
Tsu07g04623 160 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 41 58 IPR020892 GO:0003755|GO:0006457
Tsu07g04623 160 CDD cyclophilin_ABH_like 2 155 - -
Tsu07g04623 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 10 25 IPR002130 GO:0000413|GO:0003755
Tsu07g04623 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 89 104 IPR002130 GO:0000413|GO:0003755
Tsu07g04623 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 58 IPR002130 GO:0000413|GO:0003755
Tsu07g04623 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 116 IPR002130 GO:0000413|GO:0003755
Tsu07g04623 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 132 IPR002130 GO:0000413|GO:0003755
Tsu07g04623 160 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 159 - -
Tsu07g04623 160 Gene3D - 1 160 IPR029000 -
Tsu07g04623 160 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 155 IPR002130 GO:0000413|GO:0003755
Tsu07g04623 160 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04623 Tsu-Chr7 50805511 50805993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04623 4 151 U-box Gene Family AT5G67530 48.667 8.07e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04623 K01802 - zju:107412176 296.975