Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04620 ATGAACTACCTCACTCCACACCCAAACATTCTTAAAATCTTCGACTGCTTCGAAGACAATTATTTCACCTACATGGTACTTGAACTCTGCCAAACTAACGACCTCTGCGAACTCATTATAAAACGAGGTCCGTTGTCGGAGCCACAAGCTGCGTGTCTCATCAAGAAGCTTCTACAAGCTATAGAACACTGTCATAAAAACGGAGTAGCACATAGAGACATAAAACCAGAGAacgttttgtttgattttaacgGAAACGTTAAACtttgtgattttggtttttcAGAGATGTTTATTAAGTATGGAAGCAGGAGAAGTATGAGTGGTGTTGTGGGAACAGCTTTTTATGcagcacctgaagtggttttgGGAAAAGAATGTTATAACGAGAAAGTTGATATTTGGAGTTGTGGTGTTACTCTTTATGTTATGTTGAGTGGGATAATGCCCTTCATTGGAGAAACTAATGATGAGATTGTTAAGAATATCTTGAAGAATGATTTGAAGTTTCCAAAGGAAAATTTCAAATCAGTTTCGTCGTCTGTTATAGGTCTTATTAGGAAGATGGTTTGTTGGGAACCCTCATGCCGAATATCAGCTCAGCAAGCCTTGATGCATCCGTGGATCGTGAAAGGAGGTGTGGTTAAAGATTATCATGTCAATGATGTGTTTGGTTCCACATTGAAACGCAACATCCGTCCGTCCAACAAGCTTTCTATCTTGAGAACAAGAAGCTACAAAGTGTAG 747 0.3641 MNYLTPHPNILKIFDCFEDNYFTYMVLELCQTNDLCELIIKRGPLSEPQAACLIKKLLQAIEHCHKNGVAHRDIKPENVLFDFNGNVKLCDFGFSEMFIKYGSRRSMSGVVGTAFYAAPEVVLGKECYNEKVDIWSCGVTLYVMLSGIMPFIGETNDEIVKNILKNDLKFPKENFKSVSSSVIGLIRKMVCWEPSCRISAQQALMHPWIVKGGVVKDYHVNDVFGSTLKRNIRPSNKLSILRTRSYKV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04620 248 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 216 - -
Tsu07g04620 248 SMART serkin_6 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04620 248 SUPERFAMILY Protein kinase-like (PK-like) 5 215 IPR011009 -
Tsu07g04620 248 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04620 248 Gene3D Transferase(Phosphotransferase) domain 1 1 242 - -
Tsu07g04620 248 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 1 216 - -
Tsu07g04620 248 Pfam Protein kinase domain 4 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04620 248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04620 Tsu-Chr7 50790612 50791770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04620 1 230 EF-hand Containing Proteins AT1G35670 41.202 3.51e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g04620 Pkinase 1.6e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04620 - K08794 mtr:MTR_7g116390 263.848