Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04619 ATGAACTACCTCACTCCACACCCAAACATTCTTAAAATCTTCGACTGCTTTGAAGACAATTATTTCTCCTACATTGTACTTGAACTCTGCCAAACTAACGACCTCAGTGAACGCATCAAACAAGGTGGTCCATTATCGGAGCCACTAGTTGCATGTCTCGTCAAAAATCTCCTGGAAGCGATAGAGCACTGTCATGAAAACGGAGTAGCACATAGAGACATAAAACCCGAGaatgttttgattgattttaacGGAAACATTAAACTTGGTAATTTTGGTTTTTCAGAATGGTTTATTAAAGAAGGAATCAAGAAAAGTATGATTGGTGTTGTGGGAACACCTTCTTATTCGGCACCTGAGGTGGTTTTTGGAAAAGAGTGTTATAATGAGAAAGTTGATATTTGGAGTTGTGGTGTTACTCTGTATGTTATGTTGACCGGGATAATGTCCTTCGTTGGAGAAACTAATGACGAGATTGTTAAGAAGATCTTGAAGACAGATATGAGGTTTCCAGAGGAAAAATCTGAATATGTATCGTCGTCTGCTATAGATCTTATTAGGATGATGGTTTGTAGGGAACCCTCATTCCGAATATCAGCTAAGCAAGCCTTGATGCATCCATGGATCGTGAAAGGAGGTATGATTAAAGATTATCATGTCATTGATGTGTTTGATTTGGTTCCACATTGA 690 0.3783 MNYLTPHPNILKIFDCFEDNYFSYIVLELCQTNDLSERIKQGGPLSEPLVACLVKNLLEAIEHCHENGVAHRDIKPENVLIDFNGNIKLGNFGFSEWFIKEGIKKSMIGVVGTPSYSAPEVVFGKECYNEKVDIWSCGVTLYVMLTGIMSFVGETNDEIVKKILKTDMRFPEEKSEYVSSSAIDLIRMMVCREPSFRISAKQALMHPWIVKGGMIKDYHVIDVFDLVPH 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04619 229 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 216 - -
Tsu07g04619 229 PIRSF ILK 3 204 - -
Tsu07g04619 229 Gene3D Transferase(Phosphotransferase) domain 1 1 222 - -
Tsu07g04619 229 Pfam Protein kinase domain 4 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04619 229 SUPERFAMILY Protein kinase-like (PK-like) 5 214 IPR011009 -
Tsu07g04619 229 SMART serkin_6 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04619 229 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 1 216 - -
Tsu07g04619 229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Tsu07g04619 229 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04619 Tsu-Chr7 50786622 50787860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04619 1 210 EF-hand Containing Proteins AT4G09570 42.723 3.30e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu07g04619 Pkinase 1.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04619 - K08794 mtr:MTR_7g116390 258.07