Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04616 ATGGCTACTTACCATGTTGGTCTCCATGAAATTGGAATCATTTTCTTGCTCCAAATGATTGCTATTTCTGTAAAGCCACTCTCATTCAATTACCAACAAGGATTTAAATATGATGATGTAAAACTACAAGGAGATGCTTCTTTGATGTATTCATACATCCAACTTACTTCAACCTCAAGGTACCAAAGTAATGCTTACAGTGTCGGGCGAGTCACGTGTTTCGAGCCATTACAAATATGGGACAAGGCCTCAAGAAAACTCACTGATTTCACTACTCAATTTTCCTTTGTAATTTACTCAAATGAAACTGATTTTGGAGATGGATTGACATTTTTCTTTGCAGATCCAGAACTTCCACTTTATTACCATATAAGACAAGGAGGTGGTCTTGGTCTTGTGGATGATTATCACATAGCTAATTCTACTAGATATTCATTTCTAGCAGTGGAGTTTGATACTTACCATAATTCTTGGGATCCATCAGGTACTCATGTAGGTATAAATTTCAACTCTATGATATCAAAGATAAATAAACCATGGTTCATTGATATTAGGAGTAAGAAGATTTATAATTGTAAAATTGAGTACAATTCAAGTACTCATATTTTGAATGTTTCTTTCACTGGAAACATAACAAATGGTATGCCTTCAAGAAATTACATCTCATACAATGTTGATTTGAGAGATTACTTGCCTGAGAAGGTTATTGTTGGTTTCTCAGCTGCTACAGGATATATGTTTGAGATGAATACATTAAATTCATGGTCATTCAATTCAAGTTTAAAAATTCATGATGAGAAGAATCATAGTACAATCCCAACAAATCCTAGTCCTTCACCAATTCCAAATGTTAAAATTAGCCCTAAAATAGATAGCGAAAGAGGTACTAGTAGTATATGGGTAGAGCTAGGAGTCGGTGTAGCTATTGCAGCAAGTTTCCTTATTTTAGGAGGGGTTTGTATGTTAATTTGGAAAAGGACTAAAGTGAAAAAAGAAGATTCAATTTTTGACATGAAAATGGATGATGAATTCCAAAATGGCACCGGACCTAAAAAGTTTTGCTATCATAAATTGGCGAGTGCAACAAATAACTTTGCAGAAAAACAAAAGATCGGACAAGGTGGTTTTGGCGGTGTTTATAAAGGCTATTTGAAAGAAATAGATTCCAATGTTGCTATAAAGCGGATATCAAGAGAGTCGAAACAAGGGATTAAGGAATATGCAACTGAAGTGAAGATCATTAGCCAACTTAGGCACAGGAATTTAGTACAATTAATTGGTTGGTGTCACAAGAAAAAAGACTTTCTCCTTATATATGAATTCTTGCAAAATGGTAGCTTAGATTCTCACCTATATCGTGGAAAAAGCGTATTGACATGGCAAATGAGGTACAACATTACCATGGACTTGGCTCTAGCACTTCTATACCTTCATGAAGAATGGGAACAATGTGTGCTTCATAGGGATGTGAAAACCAGTAACATTATGTTAGACGACAATTTCAATGCTAAGCTTGGTGATTTCGGATTGGCTAGGCTTGTGGATTATGAGAAAGGATCACAGTCACAAACCACAGTTATAGCCGGGACCATGGGATACATAGCTCCTGAATATTTCACAACAGGGAAAGCAACAAAAGAATCAGATGTATACAGTTTTGGTATTGTTTCATTGGAATTAGCCAGTGGAAGAAAACCAGTTGATCTTAATGCTAAGGAGGATCAAATGGCCATATTTGATTGGGTTTGGGAGCTTTATAGATTAGGAAGGTTGCTTGAAGTAGTAGACACAAAACTTGAGGGTGTATTCGATGACGAACAAATGGAACGTTTAGTGGTTATTGGTCTTTGGTGTGCAAATCCAAATTATTCATTTAGGCCATCTGTAAGACAAGTTATTCAGGTGCTTAAACTTGAAGCTCCTTTACCAATTCTTCCATCTCCAACAAAGAGTACAACTATTGGCCATGTTTCTTCTGCCTCTCCGCGGCGGCTTACACTTCATAACCAGCAAGAATAA 2019 0.3621 MATYHVGLHEIGIIFLLQMIAISVKPLSFNYQQGFKYDDVKLQGDASLMYSYIQLTSTSRYQSNAYSVGRVTCFEPLQIWDKASRKLTDFTTQFSFVIYSNETDFGDGLTFFFADPELPLYYHIRQGGGLGLVDDYHIANSTRYSFLAVEFDTYHNSWDPSGTHVGINFNSMISKINKPWFIDIRSKKIYNCKIEYNSSTHILNVSFTGNITNGMPSRNYISYNVDLRDYLPEKVIVGFSAATGYMFEMNTLNSWSFNSSLKIHDEKNHSTIPTNPSPSPIPNVKISPKIDSERGTSSIWVELGVGVAIAASFLILGGVCMLIWKRTKVKKEDSIFDMKMDDEFQNGTGPKKFCYHKLASATNNFAEKQKIGQGGFGGVYKGYLKEIDSNVAIKRISRESKQGIKEYATEVKIISQLRHRNLVQLIGWCHKKKDFLLIYEFLQNGSLDSHLYRGKSVLTWQMRYNITMDLALALLYLHEEWEQCVLHRDVKTSNIMLDDNFNAKLGDFGLARLVDYEKGSQSQTTVIAGTMGYIAPEYFTTGKATKESDVYSFGIVSLELASGRKPVDLNAKEDQMAIFDWVWELYRLGRLLEVVDTKLEGVFDDEQMERLVVIGLWCANPNYSFRPSVRQVIQVLKLEAPLPILPSPTKSTTIGHVSSASPRRLTLHNQQE 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04616 672 CDD STKc_IRAK 371 637 - -
Tsu07g04616 672 ProSiteProfiles Protein kinase domain profile. 365 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04616 672 SUPERFAMILY Protein kinase-like (PK-like) 349 648 IPR011009 -
Tsu07g04616 672 Gene3D Transferase(Phosphotransferase) domain 1 442 652 - -
Tsu07g04616 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Tsu07g04616 672 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Tsu07g04616 672 PANTHER LECTIN RECEPTOR KINASE 19 661 - -
Tsu07g04616 672 PANTHER - 19 661 - -
Tsu07g04616 672 Pfam Protein kinase domain 366 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04616 672 SMART serkin_6 365 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04616 672 ProSitePatterns Protein kinases ATP-binding region signature. 371 394 IPR017441 GO:0005524
Tsu07g04616 672 Gene3D - 25 275 - -
Tsu07g04616 672 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Tsu07g04616 672 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Tsu07g04616 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 265 IPR013320 -
Tsu07g04616 672 Gene3D Phosphorylase Kinase; domain 1 350 441 - -
Tsu07g04616 672 Pfam Legume lectin domain 27 271 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04616 Tsu-Chr7 50763505 50765523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04616 13 653 Receptor kinase-like Gene Family AT5G10530 43.011 3.87e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu07g04616 Pkinase 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04616 - - gmx:100814713 945.266