Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04615 ATGATTACTACTTCTGTAAAACCACTCTCATTTGATTACCAAGGCTTTAAATATGATGATGTGAAGCCAGAAGGAGATGCATCTTTGTTATATTCATACATCCAACTTACTTCAACCTCAAGGTACCAAACCAATACTTACAGTGTCGGTCGAATCACATGTTTCGAGCCATTACAACTATGGGACAAGACCTCAAGAAAACTCACTGATTTCACTACTAAATTTTCCTTTGTAATTTACTCAAACAAGACTAATTTTGGAGATGGATTAGCATTTTTCTTAGCAGATCCAGAACTTCCACTTCCTGAACATATGCTAGAAGGTGGTGGTCTTGGTCTTGTGGATAAATATCAAATAGTGAATTCTACCAAATATTCATTTGTAGCAGTGGAGTTTGATACTTGCCATAATCCTTGGGATCCATCAGGCATGCATGTAGGTATAAATTTCAACTCTATGGTATCTAAAATAACTAAACCATGGGTGATTGATATTAGTAATAAGACAGCTTATTATGATTGTAAAATTGAGTACAATTCAAGTAATCATAATTTAAAAGTTTCTTACACTGGTAACATAATCAATGGTAAGCCAAAAAAAAGGTACCTCTTATATAATGTTGATTTAAGAGATTCCCTACCTGAGAAGGTTATTTTTGGCTTCTCAGCTGCTACAGGAGTTGTGTTTGAGATGAATACATTAATGTCATGGTCATTCGATTCAACTTTACAAATTCATGATGTGAAAGTGTCCTCTCCAATCTCAACAAACCCTAGTCCTTCACCAATTCCCAATAGTCCTAAAATAGATAGCAAGAAAGGTACTATATGGGTAGGACTAGGAGTTGGTGTAGGTATTGCATCAATTTTCCTTATTTTAGGATGGTTTTGTATTTTAATGTGGAAAAAggataaagagaaaaaagaagattcAATTTTTGATCTAAAAATGGATGATGAATTTCAAAAGGGTTCTGGACCTAAAAGGTTTTGCTATAATAAACTAGTGTGTGCAACAAATAACTTTGAAGAGACACAAAAGATAGGACAAGGTGGTTTCGGCGGTGTTTATAAAGGCTATTTAAAAGACATAGATACCAATGTTGCTATAAAGAGGATATCGAGAGAGTCGAAACAAGGGATTAAGGAATATGCAACTGAAGTGAAGATCATTAGTCAACTTAGGCATAGGAATTTAGTACAACTAATTGGTTGGTGTCACATGAAAAAAGattttcttcttatatatgaATTCATGCAAAATGGTAGCTTAGATTCTCATCTATACCGTGGCAAAAGCGTATTGACATGGCATATGAGGTACAACATTGCTATGGACTTAGCTTCGGCGTTGTTATATCTTCATGAAGAATGGGAACAATGTGTGATTCATAGAGACATAAAATCCAGCAACATTATGTTAGACTATAATTTCAATGCTAAACTTGGCGATTTTGGGATGGCTAGGTTGGTTGATCATGAGAAAGAATCACAAAGTACAACAATAATAGCCGGGACTATGGGGTATATAGCTCCGGAATATTACACAACAGggaaagctacaaaagaatCTGATATATATAGTTTTGGTATTGTTTCATTGGAGTTAGCTAGTGGAAGAAAACCAATTGATCTTAATGCTAAAGAGGATCAAGTGACTATATTCGATTGGGTTCGTGAGCTTTATCGATTAGGTAGGTTCCTTGAAGTTGTCGACACAAAACTTGAGGGTATATTTGACGAGGAACAAATGGAACGCTTAGTCATTATTGGTCTTTGGTGTGCAAATCCAGATTATTCATTTAGGCCATCTGCAAGACAGGTGATTCAGGTGCTTAAATTTGAAGCTCCTTTGCCAATTCTACAACATATGATGTTAGAGACAATTTACTCTCCTCCAAGAATGAACACAATTTTTGGTCcagtttcttcttcctttgtgGCTTACACTTCATAA 1956 0.34 MITTSVKPLSFDYQGFKYDDVKPEGDASLLYSYIQLTSTSRYQTNTYSVGRITCFEPLQLWDKTSRKLTDFTTKFSFVIYSNKTNFGDGLAFFLADPELPLPEHMLEGGGLGLVDKYQIVNSTKYSFVAVEFDTCHNPWDPSGMHVGINFNSMVSKITKPWVIDISNKTAYYDCKIEYNSSNHNLKVSYTGNIINGKPKKRYLLYNVDLRDSLPEKVIFGFSAATGVVFEMNTLMSWSFDSTLQIHDVKVSSPISTNPSPSPIPNSPKIDSKKGTIWVGLGVGVGIASIFLILGWFCILMWKKDKEKKEDSIFDLKMDDEFQKGSGPKRFCYNKLVCATNNFEETQKIGQGGFGGVYKGYLKDIDTNVAIKRISRESKQGIKEYATEVKIISQLRHRNLVQLIGWCHMKKDFLLIYEFMQNGSLDSHLYRGKSVLTWHMRYNIAMDLASALLYLHEEWEQCVIHRDIKSSNIMLDYNFNAKLGDFGMARLVDHEKESQSTTIIAGTMGYIAPEYYTTGKATKESDIYSFGIVSLELASGRKPIDLNAKEDQVTIFDWVRELYRLGRFLEVVDTKLEGIFDEEQMERLVIIGLWCANPDYSFRPSARQVIQVLKFEAPLPILQHMMLETIYSPPRMNTIFGPVSSSFVAYTS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04615 651 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Tsu07g04615 651 ProSiteProfiles Protein kinase domain profile. 342 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04615 651 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04615 651 Gene3D Transferase(Phosphotransferase) domain 1 419 630 - -
Tsu07g04615 651 CDD lectin_legume_LecRK_Arcelin_ConA 9 243 IPR001220 GO:0030246
Tsu07g04615 651 CDD STKc_IRAK 348 613 - -
Tsu07g04615 651 ProSitePatterns Legume lectins alpha-chain signature. 213 222 IPR000985 -
Tsu07g04615 651 Pfam Legume lectin domain 9 247 IPR001220 GO:0030246
Tsu07g04615 651 PANTHER LECTIN RECEPTOR KINASE 3 650 - -
Tsu07g04615 651 Gene3D - 7 255 - -
Tsu07g04615 651 ProSitePatterns Legume lectins beta-chain signature. 128 134 IPR019825 -
Tsu07g04615 651 SMART serkin_6 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04615 651 PANTHER - 3 650 - -
Tsu07g04615 651 SUPERFAMILY Protein kinase-like (PK-like) 327 640 IPR011009 -
Tsu07g04615 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Tsu07g04615 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 8 251 IPR013320 -
Tsu07g04615 651 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04615 Tsu-Chr7 50761085 50763040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04615 46 630 Receptor kinase-like Gene Family AT5G10530 46.801 2.71e-171 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu07g04615 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04615 - - gmx:100814713 900.582