Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04603 ATgcattcttcatcttcacccGTTCTTCCAACTCTTATGGAAAGCAAATGTATGAAACCCCCGGATTCCTTTCATTGTTCACCTGTCAGGGGTCTGAATACAAACCCTAGCTCACTGCAAGCTGCTTCACTGAATCCGATCAGAAGTATTCGTCCGGTGTTTTCAACCACTGTTGAATGTCCCGGCAGCATCCCTTTTTCTCCTATTTCACAGCCTGATAATCAATATCAAGATTCTCCCTTCGCTTCTCAGACATTAGGTGACAATGTGTCTTCGGAAACACACTCAACAACATTCACTTCTCACCCTCAACAAAATGATGAGATTTCTTGGGGACCAGATCCAATGCAGGATATTCTTAGTTTTCCTGAAATTTTTTCTGTTCAGCATGATCAGGTGGAAAACAGTGCTGCTTGTTACATGAATGATGACAATGTCAAAAAATCTGATTTCGGGGAATGGGTTGAACAGCTAATGACAATTGATGATACTCTCCACCCAAATTGGAATCAGCTTCTTGGTGATGACAATGCTGCAGAACCAACACCGAAGGCAATGCAGGTTTCTCAGAATCCGCAAACACCATCTGCAGAAGTTAACATTATTTGTAATTCAGCATCAGCATCAACTGCATCTCAAACCAAGCCTAGAATGCGCTGGAGTCCAGAACTTCATGAGGCCTTTGTGGAAGCAGTTAACCAGCTTGGCGGTAGTGACAAGGCTACTCCAAAAGGTGTCCTGAATCTGATGAATGTTGAAGGCCTTACTATCTACCATGTTAAAAGCCACCTGCAGAAGTATAGAACTGCCAGATACAAACCTGAGTCACCAGAAGAAACTTCTGAGAAAAAGATGAGTtcaattgaagaaatgaaatcTCTAGACTTGAAAACGAGTAAGGGGATCACCGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTCCACGAACAACTTGAGATTCAAAGGAATTTGCAGATTCAAATTGAAAACCAAGGGAAACATCTTGAGATGATGTTTGAGAAACAGAAACTGATCGTTGACAATAAGGGATCTTCCTCTTCAAACGCGCCTTCTGCTGCACTTTTGGACACGGCACTACCTTCTTCTGTAGACAATTCAAAAACGTCAAATGATGAGCACAGCAAATTAATATGTAACACTGAAGAAAGTTCCCAGGAtgcaaacaaaaaagaaatggtAGATGAAGCTGAAGTTACCAATGAACATGAGAGGGTAGATGATCAGTTTTCTGACGTACCCCCGACAAAACGGGCAAAGATTCAATGA 1293 0.4068 MHSSSSPVLPTLMESKCMKPPDSFHCSPVRGLNTNPSSLQAASLNPIRSIRPVFSTTVECPGSIPFSPISQPDNQYQDSPFASQTLGDNVSSETHSTTFTSHPQQNDEISWGPDPMQDILSFPEIFSVQHDQVENSAACYMNDDNVKKSDFGEWVEQLMTIDDTLHPNWNQLLGDDNAAEPTPKAMQVSQNPQTPSAEVNIICNSASASTASQTKPRMRWSPELHEAFVEAVNQLGGSDKATPKGVLNLMNVEGLTIYHVKSHLQKYRTARYKPESPEETSEKKMSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRNLQIQIENQGKHLEMMFEKQKLIVDNKGSSSSNAPSAALLDTALPSSVDNSKTSNDEHSKLICNTEESSQDANKKEMVDEAEVTNEHERVDDQFSDVPPTKRAKIQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04603 430 MobiDBLite consensus disorder prediction 269 290 - -
Tsu07g04603 430 MobiDBLite consensus disorder prediction 377 422 - -
Tsu07g04603 430 Coils Coil 303 323 - -
Tsu07g04603 430 MobiDBLite consensus disorder prediction 370 430 - -
Tsu07g04603 430 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 430 IPR044848 GO:0003700
Tsu07g04603 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 272 IPR017930 -
Tsu07g04603 430 MobiDBLite consensus disorder prediction 88 107 - -
Tsu07g04603 430 Pfam MYB-CC type transfactor, LHEQLE motif 302 345 IPR025756 -
Tsu07g04603 430 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 430 - -
Tsu07g04603 430 SUPERFAMILY Homeodomain-like 213 269 IPR009057 -
Tsu07g04603 430 Pfam Myb-like DNA-binding domain 217 268 IPR001005 -
Tsu07g04603 430 Gene3D - 214 273 - -
Tsu07g04603 430 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 215 269 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04603 Tsu-Chr7 50660563 50665214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04603 93 361 G2-like Transcription Factor Family AT3G04450 49.129 2.13e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tsu07g04603 Myb_DNA-binding 9.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04603 - - mtr:MTR_7g115530 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04603 07 50660563 50665214 Tsu01g03336 01 41305238 41308224 PCT