Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04586 ATGTATATTTTCTCTTCAAACGTACATAATAAGCACACAAGTATATTGTTTTTTCTAGTTGGTATCTCTATTTTTTTGCATGGCATTCAAGGTGCATGGACAGAGGAGCCAGGTTCATTGGTATTAGGTTGTGGGTTGGATGGAGGGGGAGCCAAAGATGATGATGGAAGACAATGGAGTCCTGATAATAAGTTCTTGGCAGCAGAAGCGGGTTCAATCATGTCTAAAGCCGCATACCAAGACCCTTCGCTCTCCAATGTGGTTCCATACATGTCAGCTAGAATTTTCACATCAGAAACAACATACAAATTTAATGTTCAACCTGATAAACGTTATTGGCTCAGACTCCATTTTTATCCATCCATTTATGGAAGTTTCAACTCATTAGATTCATATTTCTCGGTGGCAGCAAATGGGATCACCCTCCTCAGCAATTTCAGCGCTTACATCACTTGTGAGGCCCTCTCACAGGCTTACATTGATAGAGAGTATTCCCTTGCTCCTTTGAATTCAGATACTTTGACTCTTACATTTAAACCTTCGGACAAGCAAAGAGGGGCTTTTGCTTTCGTCAATGGCATTCAGTTGATCCCAATGCCCGAGTTATTTCACTCTGCTGGATTGGTTGGGTATCCCAACCAAAACATAGACGTCAAAACCATAAGTTTGCAAACCATGTTTAGACTAAACGTTGGTGGGCAGTATGTGTCTCCAGCCCAAGATTCTGGCCTTTCGAGGATGTGGTATGATGACACGCCTTACCTGTATGGTGCATCCTCCGGTGTCACCAACCAAGCTTCCAAGGATGTCCGAATCACCTATCCGAACATGCCACAATACATTGCTCCTCAAACTGTCTACGCAACATCAAGATCAATGGGAAATGATAAGAACGTTAACATGGGATACAACCTCACGTGGGTTTTCCATGTTGATCCAAATTCCATGTACCTCATGAGGTTACATTTTTGTGATTATGATTATTCCAAGGTCAATCAGATTGTTTTCAATATCTTTGTCAACAACCAAACGGCACAGGCTCAAGCTGATGTTATTGCGTGGACAGGAGGTAAAGGCATGGCAACTTACAAGGATTATGTGGTATATGTCCAAGACGGTGAGGGGGACAAGCAACTTTGGCTTGCACTGCATCCAGCACTTGAGACAATGCCACAATACTATGATGCCATACTCAATGGGGTGGAGATATTCAAGCTTAATGACACGGACTTGTCTGGCTCTAATCCTCAGCCTTCAGACATGCTTCTCGAAGATCAAGCAAAGGAAAGAGGTTTCCAAACACACAGTTCATATGATAAGAAAGCTATCATTGGGGGAGCTGCTGGAGGCGCTGTAGGTGTTGCCTTTATGGTAGCAATATGTGTTGCTGTTTACCACAAGAAGAAAATAGTTCCAGGGGCAGGTGCAGGGGGAGCCACACACACAAGTTGGCTTCCCATCTATGGAAATTCACACACAAATGGCAGTAAATCCACGTCCGGGAAGAGCATTGCCAACGCAAACCTCGCTGCCATGGCTCAAGGCTTGTGTCGCTATTTTTCCTTGCAAGAGATAAAACAAGCAACCAAAAATTTTGATGAGTCCAACGTTATTGGGGTTGGTGGATTTGGAAAGGTTTACAAGGGTGAAATTGATAACAGAACGCTAGTAGCAATTAAGAGGTCAAATCCACAATCAGAACAAGGAGTCAATGAGTTCCAGACTGAGATAGAGATGCTTTCTAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGATTTTGTGAGGAAGATGATGAGATGTGCTTGGTTTATGACTACATGGCTCTTGGAACCTTTAGGGAACATTTGTATAAGGGCACCAAGCCTTTAAACATTTTAACGTGGAAGCAAAGATTGGAGATCTGCATTGGTGCTGCAAGAGGACTTCACTACCTTCACACAGGTGCCAAGTACACCATCATTCATAGAGATGtcaaaacaacaaatattctaTTGGATGAAAACTGGAATGCCAAGGTATCAGATTTTGGGTTGTCAAAAACTGGTCCAAACTTGAACGCTGCTGGCCATGGTAGTTTTGGCTACTTGGATCCCGAGTACTTTAGGAGGCAACAATTGACTGAAAAGTCTGATGTCTACTCATTTGGGGTCGTCCTCTTTGAAGCCCTTTGTGCCAGGTCTGTTCTGAATCCTAGTCTTCCAAAAGAACAAGTTAGTCTTGCAGAATGGGCAATGCTCTGCAACCAAAAAGGAACGCTAGAGGATATTGTTGACCCCAATCTCAAGGGAACAATAAATCCAGAAAGTTTGAAGAAGTTTGTGGACACGGCTGAAAAGTGTTTGTGTGATCACGGAACTGATCGTCCGTCCATGAATGATCTATTGTGGAATCTAGAATATGCTCTCAACCTGCAAGAAAACAAGGATGGTTCAACTAACTCTGCAGCTCAAACTGATGAAAATGAGTTTGAAGAAATAAACTTACGAGGCAAAGACATGTCAAAACATTATAAGAACCTGAGCCTTGAAAGTTAG 2538 0.4251 MYIFSSNVHNKHTSILFFLVGISIFLHGIQGAWTEEPGSLVLGCGLDGGGAKDDDGRQWSPDNKFLAAEAGSIMSKAAYQDPSLSNVVPYMSARIFTSETTYKFNVQPDKRYWLRLHFYPSIYGSFNSLDSYFSVAANGITLLSNFSAYITCEALSQAYIDREYSLAPLNSDTLTLTFKPSDKQRGAFAFVNGIQLIPMPELFHSAGLVGYPNQNIDVKTISLQTMFRLNVGGQYVSPAQDSGLSRMWYDDTPYLYGASSGVTNQASKDVRITYPNMPQYIAPQTVYATSRSMGNDKNVNMGYNLTWVFHVDPNSMYLMRLHFCDYDYSKVNQIVFNIFVNNQTAQAQADVIAWTGGKGMATYKDYVVYVQDGEGDKQLWLALHPALETMPQYYDAILNGVEIFKLNDTDLSGSNPQPSDMLLEDQAKERGFQTHSSYDKKAIIGGAAGGAVGVAFMVAICVAVYHKKKIVPGAGAGGATHTSWLPIYGNSHTNGSKSTSGKSIANANLAAMAQGLCRYFSLQEIKQATKNFDESNVIGVGGFGKVYKGEIDNRTLVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMALGTFREHLYKGTKPLNILTWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWNAKVSDFGLSKTGPNLNAAGHGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARSVLNPSLPKEQVSLAEWAMLCNQKGTLEDIVDPNLKGTINPESLKKFVDTAEKCLCDHGTDRPSMNDLLWNLEYALNLQENKDGSTNSAAQTDENEFEEINLRGKDMSKHYKNLSLES 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04586 845 SMART serkin_6 532 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04586 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Tsu07g04586 845 Gene3D Transferase(Phosphotransferase) domain 1 608 826 - -
Tsu07g04586 845 Gene3D Phosphorylase Kinase; domain 1 492 607 - -
Tsu07g04586 845 Pfam Protein kinase domain 533 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04586 845 ProSiteProfiles Protein kinase domain profile. 532 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g04586 845 SUPERFAMILY Protein kinase-like (PK-like) 511 800 IPR011009 -
Tsu07g04586 845 Gene3D - 221 407 - -
Tsu07g04586 845 Gene3D - 43 199 - -
Tsu07g04586 845 PANTHER OS07G0166700 PROTEIN 26 841 IPR045272 GO:0004714|GO:0006468
Tsu07g04586 845 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 26 841 - -
Tsu07g04586 845 Pfam Malectin-like domain 43 405 IPR024788 -
Tsu07g04586 845 CDD STKc_IRAK 538 800 - -
Tsu07g04586 845 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04586 Tsu-Chr7 50557746 50560878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04586 40 833 Receptor kinase-like Gene Family AT3G51550 53.667 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu07g04586 Malectin_like 1.7e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04586 - - mtr:MTR_7g115300 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04586 07 50557746 50560878 Tsu01g03365 01 41630516 41633512 PCT