Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04577 ATGGAAAGAGTGTATTCATTGGCTGAAATATCAGAGCAACAATATTTGTCAACATCAAGGATGAATCGTAGTGATTCAGAATGGATGTTTCAACAGTTTTTAGAACAAgctgatgaagaagaaacaaacaacACTTTAAATGCAAAACCTTCTACTTCAtcttcaacttcaaattcttcttCAACAGTTGATGTTAAACTCAACATAAATAGTATTGATTTTCTCAGGACCGAGCTTGATCTTGCCTGCGCCCGTGTTGCTAAGTCTCGAGAATCTTTGGTCAACCCTAAGGATCCTGACAATGGATCACAGGCATCTCATCCGCCTCTGCCTGCTTTAAAAGAATCTGGCCCTTATGGAAATGATCGATCTAAATTAAAAGTAGCTGCTGGAGTTCCTTCCATGCAAAAGAAATTTGCTGTTACAATCAGGTCAACAACAAGTGGTTTAACGGATGATGAAGAAGCCGAGGGAGAGATTAATATGAATGGATACATGGACCCTTCTGATGCGAAAAAAGTTAGGAGGATGCTCTCTAATAGGGAGTCTGCGAGACGCTCAAGAAGACGAAAGCAAGCTCATTTAACTGAGCTTGAAACACAAGTCTCTCAATTAAGAGGTGAAAATTCTTCATTGTTACAGCGTTTAACAGATGTGAACCAAAAATACAGTGATTCTGCTGCTGAAAACAGAGTATTAAATGCTAAAGTTGAAACATTAAGAGCTCAGGTGGAGTTGTTTGAAGAGAGGTTTGCAAGACGACGTGGGTTGAAACCAATGGTTAATGCAATGTCTGAGATGTCATCAATAATGGTAATGGAAATGTCATTATTTGATAGAAGCACTTCGGAGTCATCAGCCGATGCATCTGTGCATGTGCAAGAAGATCGAGATAATCACTTTTTTCAACCAACTACTATTAATCTTATGTCTGGTCATGATATGAGAGAAGTCAATAATTGGTTGGGAGGCAATGTTTCTTCAGCTGAAAGTGTGTTGAAGAACACCGTAGCAGGTGGAAACAAGATAGGAAGGACTAATTCCCTGCCGCGAGAGGCTGGCTTGGAACATCTTTAG 1077 0.3825 MERVYSLAEISEQQYLSTSRMNRSDSEWMFQQFLEQADEEETNNTLNAKPSTSSSTSNSSSTVDVKLNINSIDFLRTELDLACARVAKSRESLVNPKDPDNGSQASHPPLPALKESGPYGNDRSKLKVAAGVPSMQKKFAVTIRSTTSGLTDDEEAEGEINMNGYMDPSDAKKVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLQRLTDVNQKYSDSAAENRVLNAKVETLRAQVELFEERFARRRGLKPMVNAMSEMSSIMVMEMSLFDRSTSESSADASVHVQEDRDNHFFQPTTINLMSGHDMREVNNWLGGNVSSAESVLKNTVAGGNKIGRTNSLPREAGLEHL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04577 358 Coils Coil 230 250 - -
Tsu07g04577 358 Pfam Basic leucine-zipper C terminal 239 358 IPR020983 -
Tsu07g04577 358 MobiDBLite consensus disorder prediction 91 124 - -
Tsu07g04577 358 Gene3D - 171 227 - -
Tsu07g04577 358 SUPERFAMILY Leucine zipper domain 172 222 IPR046347 GO:0003700|GO:0006355
Tsu07g04577 358 Coils Coil 181 222 - -
Tsu07g04577 358 SMART brlzneu 168 232 IPR004827 GO:0003700|GO:0006355
Tsu07g04577 358 PANTHER BASIC LEUCINE ZIPPER 63 17 358 - -
Tsu07g04577 358 MobiDBLite consensus disorder prediction 38 62 - -
Tsu07g04577 358 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 222 IPR004827 GO:0003700|GO:0006355
Tsu07g04577 358 PANTHER BZIP TRANSCRIPTION FACTOR 17 358 - -
Tsu07g04577 358 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 175 190 IPR004827 GO:0003700|GO:0006355
Tsu07g04577 358 Pfam bZIP transcription factor 171 224 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04577 Tsu-Chr7 50499486 50502514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04577 112 253 bZIP Transcription Factor Family AT5G24800 44.371 1.11e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu07g04577 bZIP_C 7.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04577 K25784 - gmx:778137 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04577 07 50499486 50502514 Tsu07g04577 07 50499486 50502514 ECH
Tsu07g04577 07 50499486 50502514 Tsu01g03381 01 41815268 41821583 PCT