Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04574 ATGGAGTTACCTTCAAACTTATTGTCTGATGAGGCAAGTCCAGAGTGGATGAACAAAGGAGACAACGCATGGCAATTAACAGCAGCAACAATGGTTGGACTTCAAAGCATTCCTGGTCTTGTAATCCTATACGGAAGCCTAGTAAAGAAAACATGGGCTATAAACTCTGCTTTCATGGCTTTTTATGCTTTTGCAGCAGTTCTCTTATGTTGGGTTTCATGGGCTTATCATATGTCATTTGGGGACAAAATGGTATTTTTCTTAGGGAAACCAGGAATAGCATTAGATGAGAAGTTTTTATTAGGAAAAGCATTTTTGGGAAATTTTCCTAATGCTACAATGGTATTTTATCAAGGTGTATTTGCTGGTattactttgattttgataGCTGGTGCTTTACTTGGAAGAATGAATATTCGTGCATGGATGTTGTTTGTGCCACTTTGGGTTACATTTTCTTACACTGTTGTTGCTTTTAGTATTTGGTGTCCTGATGGTTGGTTGGCTAAACGTGGTGTTATTGATTTTGCTGGTGGTTATGTTATTCACCTCTCTGCTGGTGTTGCTGGTTTCACTGCAGCTTATTGGGTTGGTCCTCGAGCAGAGAAGGACAGGGAAACATTTCCGGCAGCAGCAAACAACATGATAATGGTGCTTGCAGGCGCAGGCCTGCTTTGGATGGGTTGGAGTGGATTCAATGGTGGAGGTCCATTTGTAGCTAGTACCATTGCATCTCTTGCTGTCCTAAACACACACGTGTGTACCGCTGCTAGCATCATCGTATGGATCACACTCGATACCTTCTACTTCGGCAAGCCTACCGTGTTTGGCGCCGTACAAGGCATGATCACCGGTCTCGTTTGTATCACACCTGCCGCAGGAATTGTGCAGGGGTGGGCAGCAATGTTAATGGGTTTGATCTCAGGAAGTATTCCATGGTACACAATGATGGTACTCCACAACAAGGTTAATTTCTTAATGAAAATTGACGATCCCATGGCGGTGTTCCACACTCACGCAATAGCTGGTGCTCTTGGCGGAATTCTAACCGGCTTCTTTGCCGTGCCAAAATTATGTCGTCTCTTCTACATGGTGCCCGATTGGGAAAAATACATCGGCCTCGCCTATGGCCTACAAAATAGCGGTGCAACTCGAGCGGGGTTGAAACAAATGTTGATCCAAGTTGAGGCCATAGTTTTTGTGATTTGCTACAATGTTGTTGTGACTAGTTTAATTTGCTTGCTTGTGAGAGTCATGGTACCACTTAGGCTTGATAGTGATACGTTGCAAATGGGTGATAGGGCAATTCATGGAGAGGATGCTTTTGCCTTGCATAGTGAGGCAACTAAATTTGTGAACATTAAGCGCAATAAGATTTATGATACTCAAGATTTCTCGTCCAATTATATGTCTAGGTCATTGGGTGAGCTTCAAATGGTATGA 1443 0.4283 MELPSNLLSDEASPEWMNKGDNAWQLTAATMVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFAAVLLCWVSWAYHMSFGDKMVFFLGKPGIALDEKFLLGKAFLGNFPNATMVFYQGVFAGITLILIAGALLGRMNIRAWMLFVPLWVTFSYTVVAFSIWCPDGWLAKRGVIDFAGGYVIHLSAGVAGFTAAYWVGPRAEKDRETFPAAANNMIMVLAGAGLLWMGWSGFNGGGPFVASTIASLAVLNTHVCTAASIIVWITLDTFYFGKPTVFGAVQGMITGLVCITPAAGIVQGWAAMLMGLISGSIPWYTMMVLHNKVNFLMKIDDPMAVFHTHAIAGALGGILTGFFAVPKLCRLFYMVPDWEKYIGLAYGLQNSGATRAGLKQMLIQVEAIVFVICYNVVVTSLICLLVRVMVPLRLDSDTLQMGDRAIHGEDAFALHSEATKFVNIKRNKIYDTQDFSSNYMSRSLGELQMV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04574 480 PANTHER AMMONIUM TRANSPORTER 1 480 - -
Tsu07g04574 480 Pfam Ammonium Transporter Family 23 441 IPR024041 GO:0008519|GO:0016020|GO:0072488
Tsu07g04574 480 PANTHER AMMONIUM TRANSPORTER MEP2 1 480 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tsu07g04574 480 SUPERFAMILY Ammonium transporter 16 424 - -
Tsu07g04574 480 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005887
Tsu07g04574 480 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005887
Tsu07g04574 480 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005887
Tsu07g04574 480 PRINTS Rhesus blood group protein signature 302 320 IPR002229 GO:0005887
Tsu07g04574 480 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Tsu07g04574 480 Gene3D Ammonium transporter AmtB like domains 5 460 IPR029020 -
Tsu07g04574 480 TIGRFAM amt: ammonium transporter 21 441 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04574 Tsu-Chr7 50480545 50482817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04574 112 468 Inorganic Solute Cotransporters AT2G38290 52.941 1.34e-123 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04574 K03320 - gmx:100782944 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04574 07 50480545 50482817 Tsu07g04574 07 50480545 50482817 ECH