Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04562 ATGGATCCATCACTCTGTGCTAATGGTTGTGGTTTCTATGGTTCTCCTTCAAACAAGAACCTTTGTTCAAAGTGTTACAAAGATTATCTCAAAGAAAACGCTTCCAAATCAAATGATGAAAGCTCAAAGTCAACATCTTCTTGTCCTTCAAAGAACCctaatgttgatgatgtttgtgaTGCTGTGGCAGCTGTTTCTCTCACTACCAATGAGaacttgaagaagaagaagaataggTGCAAGAGTTGCAACAAAAAAGTGGGACTGATAGGGTTCGAGTGTCGTTGTGGTGATGTGTTTTGTGGAATGCATAGATATCCGGAAGAACAttcatgcaaagtgaatttaAAGGAGATTGGTCGTAAACTATTAGATAAACAAAACCCTTTGTGTATGGGTGATAAGTTAGAACACCGAATCTAG 423 0.3357 MDPSLCANGCGFYGSPSNKNLCSKCYKDYLKENASKSNDESSKSTSSCPSKNPNVDDVCDAVAAVSLTTNENLKKKKNRCKSCNKKVGLIGFECRCGDVFCGMHRYPEEHSCKVNLKEIGRKLLDKQNPLCMGDKLEHRI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04562 140 Pfam AN1-like Zinc finger 80 113 IPR000058 GO:0008270
Tsu07g04562 140 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 140 - -
Tsu07g04562 140 SUPERFAMILY AN1-like Zinc finger 69 134 IPR035896 -
Tsu07g04562 140 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 140 - -
Tsu07g04562 140 Gene3D - 1 54 - -
Tsu07g04562 140 ProSiteProfiles Zinc finger AN1-type profile. 74 120 IPR000058 GO:0008270
Tsu07g04562 140 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 47 - -
Tsu07g04562 140 MobiDBLite consensus disorder prediction 34 55 - -
Tsu07g04562 140 Gene3D - 64 123 IPR035896 -
Tsu07g04562 140 SMART AN1_Zf_4 80 117 IPR000058 GO:0008270
Tsu07g04562 140 MobiDBLite consensus disorder prediction 39 53 - -
Tsu07g04562 140 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Tsu07g04562 140 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
Tsu07g04562 140 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04562 Tsu-Chr7 50412311 50412733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04562 5 137 C2H2 Transcription Factor Family AT3G52800 40.909 1.82e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04562 - - gmx:102663114 172.17