Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04561 ATGGATCCATCACTCTGTGCTAATGGTTGTGGTTTTTATGGTTCTCCTTCAAACAAGAACCTTTGTTCAAAGTGTTACAAAGATTATCTCAAAGAAAACGCTTCCAAATCAAATGATGAAAGCTCAAAGTCAACATCTTCTTGTCCTTCAAAGAACCctaatgttgatgatgtttgtgaTGTTGTGGCAGCTGTTTCTCTCACTACCAATGAGaacttgaagaagaaaaataggTGCAAGAGTTGCAACAAAAAAGTGGGACTGATAGGGTTTGAGTGTCGTTGTGGCGATGTGTTTTGTGGAATGCATAGATACGCAGAAGAACAttcatgcaaagtgaatttaAAGGAGATTGGTCGTAAACTATTAGATAAACAAAACCCTTTGTGTATGGGTGATAAGTTAGAACACCGAATCTAG 420 0.3333 MDPSLCANGCGFYGSPSNKNLCSKCYKDYLKENASKSNDESSKSTSSCPSKNPNVDDVCDVVAAVSLTTNENLKKKNRCKSCNKKVGLIGFECRCGDVFCGMHRYAEEHSCKVNLKEIGRKLLDKQNPLCMGDKLEHRI 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04561 139 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 139 - -
Tsu07g04561 139 Pfam AN1-like Zinc finger 79 112 IPR000058 GO:0008270
Tsu07g04561 139 ProSiteProfiles Zinc finger AN1-type profile. 73 119 IPR000058 GO:0008270
Tsu07g04561 139 Gene3D - 65 122 IPR035896 -
Tsu07g04561 139 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 47 - -
Tsu07g04561 139 MobiDBLite consensus disorder prediction 34 55 - -
Tsu07g04561 139 MobiDBLite consensus disorder prediction 39 53 - -
Tsu07g04561 139 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Tsu07g04561 139 Gene3D - 1 54 - -
Tsu07g04561 139 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 139 - -
Tsu07g04561 139 SMART AN1_Zf_4 79 116 IPR000058 GO:0008270
Tsu07g04561 139 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
Tsu07g04561 139 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Tsu07g04561 139 SUPERFAMILY AN1-like Zinc finger 68 133 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04561 Tsu-Chr7 50408462 50408881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04561 5 136 C2H2 Transcription Factor Family AT3G52800 39.610 1.02e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04561 - - gmx:102666624 171.4