Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04559 ATGGGGAAGGCAAGCAAATGGATTAGAAACCTTCTTCTAGGGAAAAAAGAAGAGAACTTAAAGCAGATTGATACATTCTGCTCCGAGAATAAGACTGCAAACACGATTAGTAGTAGTCgtaatagtaatagtagtaataataagatAGTAGTGAAGCGCAAATGGAGTTTCCGAAGACTAACAAGTGGAAGATCAACAGGAAAAGTAGTAGCTCATAAAATttccaagtcttttgattcagTTGACTCTCCAAAATTGCAAATACAAGCCTTAATGTTCCAAACTCAGACCCCAAGAACAGCTGCTGAATTTGTAAGAACAGCTGCAACAAGGATTCAAGCTTCCTTCCGCTCTTACTTGGCAAGGAGAGCATTGCATGCTTTAAGAGGATTAGTGAAGTTACAAGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCAACACTGCGTGGGATGCATGCATTGATGTCCATACAAGTTAGAGCTCGAATTAAAAGGATTACGATGGCAGAAGAAGTAATTCCCCCGGAAATAACACCTCCCCAACACACAGAAAGTCCCTGCTTCAAAGAGTACATGACACAACCAAAACAACATCAAGATTCAAAGAATATGAATGTGGAAGAAATGTTAGAGGCATTGAGGAGTAGAAGTGGGCCACTAGATGTAAAGAGCAGAAAGTATGATTCAATGGCATACTATTCAAAGAGTCAATCAATTTCAAAACGAGAAAATCAATTGAAGAATGAGAatcataacaataacaatactGCTACTACAATCATCACAGCACCAAACAGTCCAGAAAAATACTACAGAGACATGATTGATTATTTAAATCCAAGATCATCAATTACATTATCAACATCTCAGCGCCACATGGCACCTCCTCGACAATCATGGTCATCACCAAAAAATTACATGAACAAGACAGAATCTTCAAAGGCAAAAACAAGGTCTAGTAGTGAACCAAGACAAAGACCCACCAAAcaaggaacaaagcaaaaaaacaGCAACTCTATAGAATGTAGTACTAGTAGTTCattgaagaaaaatatgttGTCAAATTCAGCAAGGTATGATCATTGGGTTGTTAATTCAATGAAGGAGAGTAACCGTGACTCATTTGGTAGCTACACAGTCACTACTAGTGATGATTCCTACTACTCATGA 1179 0.3588 MGKASKWIRNLLLGKKEENLKQIDTFCSENKTANTISSSRNSNSSNNKIVVKRKWSFRRLTSGRSTGKVVAHKISKSFDSVDSPKLQIQALMFQTQTPRTAAEFVRTAATRIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMSIQVRARIKRITMAEEVIPPEITPPQHTESPCFKEYMTQPKQHQDSKNMNVEEMLEALRSRSGPLDVKSRKYDSMAYYSKSQSISKRENQLKNENHNNNNTATTIITAPNSPEKYYRDMIDYLNPRSSITLSTSQRHMAPPRQSWSSPKNYMNKTESSKAKTRSSSEPRQRPTKQGTKQKNSNSIECSTSSSLKKNMLSNSARYDHWVVNSMKESNRDSFGSYTVTTSDDSYYS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04559 392 MobiDBLite consensus disorder prediction 238 267 - -
Tsu07g04559 392 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Tsu07g04559 392 MobiDBLite consensus disorder prediction 289 317 - -
Tsu07g04559 392 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Tsu07g04559 392 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Tsu07g04559 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 147 IPR027417 -
Tsu07g04559 392 MobiDBLite consensus disorder prediction 252 267 - -
Tsu07g04559 392 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 377 - -
Tsu07g04559 392 Pfam Protein of unknown function (DUF4005) 298 373 IPR025064 -
Tsu07g04559 392 MobiDBLite consensus disorder prediction 373 392 - -
Tsu07g04559 392 MobiDBLite consensus disorder prediction 289 353 - -
Tsu07g04559 392 MobiDBLite consensus disorder prediction 327 353 - -
Tsu07g04559 392 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Tsu07g04559 392 Gene3D - 102 158 - -
Tsu07g04559 392 PANTHER IQ-DOMAIN 5-RELATED 1 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04559 Tsu-Chr7 50401234 50402796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04559 1 337 IQD Protein Family AT4G14750 34.366 1.31e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04559 - - gmx:100527816 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04559 07 50401234 50402796 Tsu07g04559 07 50401234 50402796 ECH