Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04547 atgGCTTCACAACAACACGACACCGTTTTTCCCGATGAAGACATCGACGACGAAGACGAAGAATTTCACGAAtacgaagaagatgaagaagaagacgaCGTTTTAGTCGAAGACGAAGAAAACGATCCTCCTTCTTCTATCACCGCTCCCTCCGTCACCGTCGCCGTTCCCGGTTCCGTCAATTCCAACGGAGAAACCAGACCTCCAATTTTGACTCCAACCGCAACAACAATCGTTTTCGCAAACTCCTTCCCCGATTCAAAACGCCAACGTTTAGatcaaattgaagaaaaaaaacctcCTCTCGAAGATTCACGTAAGCTTTTTCAACGTCTATGGACCGACGAAGACGAGATGGAACTCTTACAAGGTTTTCTCGATTACACAACACAGAGAGGTTCTTCTCATCACAACGACACCGCTCAATTCTACGATCAAATCAAATCGAAACTTCAACTCGATTTCAACAAGAATCAGCTCGTAGAGAAGATCCGAAGGTTGAAGAAGAAATACCGAAACGTTCTAAACAAAATCAGTTCCGGTAAGGAATTCGTCTTCAAAACTGCTCATGATCAAGCTACTTTTGAAATCTCGCGCAAGATCTGGAACAACGTGGCGCCAATCGCCGGTGATATTGCCATTGACGACGAAGAAATCAACCTCAATCCAAGTCCCAACCCTAACCTCAATTTCACTCCCGTAATTCTCAAGGCTGAATCAACTTCGCATACGCGAAAGCGTTCACGGCCTCGATCTGCAATCAGAAGCTTCGAGAAGCGTGAATCAAATGATTTATCTATCAGAGATCGTGATTATCTCAATATCAACCTCAACAATCCTAATCCTAATCCTTTTCATAATTCTTTTCCTAATCATAATCTTAATCCTAATCCTGTTGCTAATCCTATCATAGCTACTACTAGCGCAACTGTTAatacagcaacaacaacaataccTGCAATTACTACTACTCCTAATACTAATCCTGCAATTAATGCTAATAATTATAGTAATAATTGTAGTAGTAACATTGGGAACAGTGTAGCAGGTGTGATTGAAGAAACGGTGAGGAGTTGTTTATCGCCGTTGTTGAAGGAATTGATGACCAGTGCGATGGGAGGACCGTTCGGAGCAAGAGGCaccggtggtggtggtggtttcGCGATGAATCCGTTGCAGTTGATGAATTTAGGTTATGGAGAAGTGGTGGATGAGAAATGGAGGAAGCAACAGATTTTGGAATTGGAAGTGTATTCAAAGAGATTGGAATTAGTTCAAGATCAGATCAAAGCATCTATCGATGAATTGCGTTCGGTTGGTGGATCAACCttttag 1335 0.394 MASQQHDTVFPDEDIDDEDEEFHEYEEDEEEDDVLVEDEENDPPSSITAPSVTVAVPGSVNSNGETRPPILTPTATTIVFANSFPDSKRQRLDQIEEKKPPLEDSRKLFQRLWTDEDEMELLQGFLDYTTQRGSSHHNDTAQFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKISSGKEFVFKTAHDQATFEISRKIWNNVAPIAGDIAIDDEEINLNPSPNPNLNFTPVILKAESTSHTRKRSRPRSAIRSFEKRESNDLSIRDRDYLNINLNNPNPNPFHNSFPNHNLNPNPVANPIIATTSATVNTATTTIPAITTTPNTNPAINANNYSNNCSSNIGNSVAGVIEETVRSCLSPLLKELMTSAMGGPFGARGTGGGGGFAMNPLQLMNLGYGEVVDEKWRKQQILELEVYSKRLELVQDQIKASIDELRSVGGSTF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04547 444 MobiDBLite consensus disorder prediction 11 40 - -
Tsu07g04547 444 MobiDBLite consensus disorder prediction 44 71 - -
Tsu07g04547 444 Pfam Protein of unknown function, DUF573 109 203 IPR007592 GO:0006355
Tsu07g04547 444 Coils Coil 157 177 - -
Tsu07g04547 444 MobiDBLite consensus disorder prediction 1 71 - -
Tsu07g04547 444 PANTHER BNAANNG10740D PROTEIN 1 440 - -
Tsu07g04547 444 PANTHER BNAANNG10740D PROTEIN-RELATED 1 440 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04547 Tsu-Chr7 50322969 50324673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04547 1 439 GeBP Transcription Factor Family AT5G28040 38.877 4.13e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tsu07g04547 DUF573 1e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04547 - - mtr:MTR_7g114600 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04547 07 50322969 50324673 Tsu01g03401 01 42055660 42056858 PCT